Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 RN7SL277P-201ENST00000481521 288 ntBASIC17.15■□□□□ 0.34
POLR3DP05423 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC17.15■□□□□ 0.34
POLR3DP05423 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
POLR3DP05423 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC17.15■□□□□ 0.34
POLR3DP05423 AC140658.4-201ENST00000561990 352 ntBASIC17.15■□□□□ 0.34
POLR3DP05423 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC17.15■□□□□ 0.34
POLR3DP05423 RN7SL190P-201ENST00000582519 257 ntBASIC17.15■□□□□ 0.34
POLR3DP05423 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
POLR3DP05423 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC17.15■□□□□ 0.34
POLR3DP05423 MIR6074-201ENST00000612054 107 ntBASIC17.15■□□□□ 0.34
POLR3DP05423 AC090386.2-201ENST00000623010 1039 ntBASIC17.15■□□□□ 0.34
POLR3DP05423 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC17.15■□□□□ 0.34
POLR3DP05423 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC17.15■□□□□ 0.34
POLR3DP05423 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
POLR3DP05423 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
POLR3DP05423 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC17.15■□□□□ 0.34
POLR3DP05423 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
POLR3DP05423 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
POLR3DP05423 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
POLR3DP05423 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
POLR3DP05423 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC17.15■□□□□ 0.34
POLR3DP05423 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
POLR3DP05423 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
POLR3DP05423 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
POLR3DP05423 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
POLR3DP05423 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC17.14■□□□□ 0.33
POLR3DP05423 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC17.14■□□□□ 0.33
POLR3DP05423 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
POLR3DP05423 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
POLR3DP05423 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
POLR3DP05423 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
POLR3DP05423 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
POLR3DP05423 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
POLR3DP05423 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
POLR3DP05423 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
POLR3DP05423 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
POLR3DP05423 LAP3P2-201ENST00000454686 1454 ntBASIC17.14■□□□□ 0.33
POLR3DP05423 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
POLR3DP05423 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
POLR3DP05423 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
POLR3DP05423 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
POLR3DP05423 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
POLR3DP05423 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
POLR3DP05423 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
POLR3DP05423 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
POLR3DP05423 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
POLR3DP05423 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC17.14■□□□□ 0.33
POLR3DP05423 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
POLR3DP05423 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC17.14■□□□□ 0.33
POLR3DP05423 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC17.14■□□□□ 0.33
POLR3DP05423 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
POLR3DP05423 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC17.14■□□□□ 0.33
POLR3DP05423 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC17.14■□□□□ 0.33
POLR3DP05423 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC17.14■□□□□ 0.33
POLR3DP05423 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC17.14■□□□□ 0.33
POLR3DP05423 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
POLR3DP05423 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
POLR3DP05423 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
POLR3DP05423 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
POLR3DP05423 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC17.14■□□□□ 0.33
POLR3DP05423 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
POLR3DP05423 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
POLR3DP05423 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
POLR3DP05423 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
POLR3DP05423 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
POLR3DP05423 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
POLR3DP05423 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
POLR3DP05423 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
POLR3DP05423 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
POLR3DP05423 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
POLR3DP05423 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
POLR3DP05423 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC17.13■□□□□ 0.33
POLR3DP05423 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
POLR3DP05423 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
POLR3DP05423 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC17.13■□□□□ 0.33
POLR3DP05423 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
POLR3DP05423 JTB-202ENST00000356648 1040 ntTSL 2 BASIC17.13■□□□□ 0.33
POLR3DP05423 AL583805.1-201ENST00000391389 531 ntBASIC17.13■□□□□ 0.33
POLR3DP05423 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
POLR3DP05423 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC17.13■□□□□ 0.33
POLR3DP05423 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC17.13■□□□□ 0.33
POLR3DP05423 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC17.13■□□□□ 0.33
POLR3DP05423 RPSAP15-201ENST00000448168 861 ntBASIC17.13■□□□□ 0.33
POLR3DP05423 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC17.13■□□□□ 0.33
POLR3DP05423 AP000358.1-201ENST00000456260 156 ntBASIC17.13■□□□□ 0.33
POLR3DP05423 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC17.13■□□□□ 0.33
POLR3DP05423 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
POLR3DP05423 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC17.13■□□□□ 0.33
POLR3DP05423 AC019193.1-201ENST00000506678 823 ntBASIC17.13■□□□□ 0.33
POLR3DP05423 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC17.13■□□□□ 0.33
POLR3DP05423 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC17.13■□□□□ 0.33
POLR3DP05423 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC17.13■□□□□ 0.33
POLR3DP05423 MIR3677-201ENST00000578964 60 ntBASIC17.13■□□□□ 0.33
POLR3DP05423 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC17.13■□□□□ 0.33
POLR3DP05423 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
POLR3DP05423 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC17.13■□□□□ 0.33
POLR3DP05423 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC17.13■□□□□ 0.33
POLR3DP05423 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
POLR3DP05423 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
POLR3DP05423 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms