Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.49□□□□□ -0.09
GPC4O75487 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
GPC4O75487 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.49□□□□□ -0.09
GPC4O75487 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
GPC4O75487 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
GPC4O75487 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
GPC4O75487 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GPC4O75487 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC14.48□□□□□ -0.09
GPC4O75487 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GPC4O75487 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.48□□□□□ -0.09
GPC4O75487 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
GPC4O75487 CICP17-201ENST00000418553 2377 ntBASIC14.48□□□□□ -0.09
GPC4O75487 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.48□□□□□ -0.09
GPC4O75487 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GPC4O75487 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
GPC4O75487 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GPC4O75487 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.48□□□□□ -0.09
GPC4O75487 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GPC4O75487 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC14.48□□□□□ -0.09
GPC4O75487 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
GPC4O75487 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GPC4O75487 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GPC4O75487 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
GPC4O75487 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GPC4O75487 TCAM1P-207ENST00000485295 1537 ntBASIC14.48□□□□□ -0.09
GPC4O75487 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.48□□□□□ -0.09
GPC4O75487 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
GPC4O75487 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
GPC4O75487 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.48□□□□□ -0.09
GPC4O75487 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.48□□□□□ -0.09
GPC4O75487 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.48□□□□□ -0.09
GPC4O75487 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.48□□□□□ -0.09
GPC4O75487 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.48□□□□□ -0.09
GPC4O75487 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GPC4O75487 RNA5SP412-201ENST00000516234 123 ntBASIC14.48□□□□□ -0.09
GPC4O75487 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.48□□□□□ -0.09
GPC4O75487 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.48□□□□□ -0.09
GPC4O75487 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.48□□□□□ -0.09
GPC4O75487 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.48□□□□□ -0.09
GPC4O75487 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GPC4O75487 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
GPC4O75487 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.48□□□□□ -0.09
GPC4O75487 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GPC4O75487 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
GPC4O75487 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GPC4O75487 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GPC4O75487 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
GPC4O75487 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
GPC4O75487 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
GPC4O75487 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
GPC4O75487 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
GPC4O75487 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GPC4O75487 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GPC4O75487 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GPC4O75487 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
GPC4O75487 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GPC4O75487 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.48□□□□□ -0.09
GPC4O75487 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.48□□□□□ -0.09
GPC4O75487 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.48□□□□□ -0.09
GPC4O75487 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
GPC4O75487 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
GPC4O75487 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
GPC4O75487 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GPC4O75487 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
GPC4O75487 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GPC4O75487 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GPC4O75487 SHC1P1-201ENST00000425230 1745 ntBASIC14.47□□□□□ -0.09
GPC4O75487 AL023775.1-201ENST00000454907 1746 ntBASIC14.47□□□□□ -0.09
GPC4O75487 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GPC4O75487 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GPC4O75487 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
GPC4O75487 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
GPC4O75487 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
GPC4O75487 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GPC4O75487 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
GPC4O75487 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
GPC4O75487 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GPC4O75487 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
GPC4O75487 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GPC4O75487 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GPC4O75487 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GPC4O75487 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GPC4O75487 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.47□□□□□ -0.09
GPC4O75487 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
GPC4O75487 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
GPC4O75487 YBX1P6-201ENST00000442962 1002 ntBASIC14.47□□□□□ -0.09
GPC4O75487 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.47□□□□□ -0.09
GPC4O75487 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.47□□□□□ -0.09
GPC4O75487 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
GPC4O75487 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.47□□□□□ -0.09
GPC4O75487 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
GPC4O75487 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.47□□□□□ -0.09
GPC4O75487 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GPC4O75487 AL136301.1-201ENST00000615830 422 ntBASIC14.47□□□□□ -0.09
GPC4O75487 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
GPC4O75487 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
GPC4O75487 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.47□□□□□ -0.09
GPC4O75487 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GPC4O75487 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GPC4O75487 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms