Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CCDC78A2IDD5 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC78A2IDD5 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC78A2IDD5 AL137784.3-201ENST00000623858 2288 ntBASIC14.62□□□□□ -0.07
CCDC78A2IDD5 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC14.62□□□□□ -0.07
CCDC78A2IDD5 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.62□□□□□ -0.07
CCDC78A2IDD5 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC78A2IDD5 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC78A2IDD5 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC78A2IDD5 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC78A2IDD5 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC78A2IDD5 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC78A2IDD5 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.62□□□□□ -0.07
CCDC78A2IDD5 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC78A2IDD5 AL161932.2-201ENST00000435436 679 ntBASIC14.62□□□□□ -0.07
CCDC78A2IDD5 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC78A2IDD5 AC022210.1-201ENST00000449856 793 ntBASIC14.62□□□□□ -0.07
CCDC78A2IDD5 AL035414.1-201ENST00000451327 857 ntBASIC14.62□□□□□ -0.07
CCDC78A2IDD5 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC78A2IDD5 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.62□□□□□ -0.07
CCDC78A2IDD5 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC78A2IDD5 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CCDC78A2IDD5 AP005482.1-201ENST00000563722 1273 ntBASIC14.62□□□□□ -0.07
CCDC78A2IDD5 AC132192.2-201ENST00000596206 1147 ntBASIC14.62□□□□□ -0.07
CCDC78A2IDD5 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.62□□□□□ -0.07
CCDC78A2IDD5 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.62□□□□□ -0.07
CCDC78A2IDD5 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CCDC78A2IDD5 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC78A2IDD5 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CCDC78A2IDD5 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC78A2IDD5 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC78A2IDD5 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.62□□□□□ -0.07
CCDC78A2IDD5 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
CCDC78A2IDD5 AL008718.2-201ENST00000609206 1313 ntBASIC14.62□□□□□ -0.07
CCDC78A2IDD5 AC064801.2-201ENST00000625052 1303 ntBASIC14.62□□□□□ -0.07
CCDC78A2IDD5 MIR497HG-202ENST00000572453 3838 ntBASIC14.62□□□□□ -0.07
CCDC78A2IDD5 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC78A2IDD5 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC78A2IDD5 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.62□□□□□ -0.07
CCDC78A2IDD5 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCDC78A2IDD5 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
CCDC78A2IDD5 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 TCAM1P-207ENST00000485295 1537 ntBASIC14.61□□□□□ -0.07
CCDC78A2IDD5 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 AC090643.2-201ENST00000623442 2029 ntBASIC14.61□□□□□ -0.07
CCDC78A2IDD5 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 KRT8P24-201ENST00000560290 1559 ntBASIC14.61□□□□□ -0.07
CCDC78A2IDD5 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 KRT223P-202ENST00000449164 1292 ntBASIC14.61□□□□□ -0.07
CCDC78A2IDD5 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 AC005586.2-201ENST00000563946 837 ntBASIC14.61□□□□□ -0.07
CCDC78A2IDD5 DUX4L46-201ENST00000566845 751 ntBASIC14.61□□□□□ -0.07
CCDC78A2IDD5 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 FAM90A12P-201ENST00000519497 2375 ntBASIC14.61□□□□□ -0.07
CCDC78A2IDD5 FAM90A24P-201ENST00000520792 2369 ntBASIC14.61□□□□□ -0.07
CCDC78A2IDD5 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC78A2IDD5 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC78A2IDD5 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.6□□□□□ -0.07
CCDC78A2IDD5 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CCDC78A2IDD5 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC78A2IDD5 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CCDC78A2IDD5 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC78A2IDD5 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC78A2IDD5 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms