Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGC4Q9Y5F7 USP17L6P-201ENST00000382470 1197 ntBASIC14.48□□□□□ -0.09
PCDHGC4Q9Y5F7 ISCA2P1-201ENST00000425548 448 ntBASIC14.48□□□□□ -0.09
PCDHGC4Q9Y5F7 Z97180.1-201ENST00000445173 988 ntBASIC14.48□□□□□ -0.09
PCDHGC4Q9Y5F7 AL596276.2-201ENST00000447525 331 ntBASIC14.48□□□□□ -0.09
PCDHGC4Q9Y5F7 AC022494.1-201ENST00000466044 728 ntBASIC14.48□□□□□ -0.09
PCDHGC4Q9Y5F7 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.48□□□□□ -0.09
PCDHGC4Q9Y5F7 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.48□□□□□ -0.09
PCDHGC4Q9Y5F7 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC14.48□□□□□ -0.09
PCDHGC4Q9Y5F7 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.48□□□□□ -0.09
PCDHGC4Q9Y5F7 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGC4Q9Y5F7 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGC4Q9Y5F7 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGC4Q9Y5F7 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
PCDHGC4Q9Y5F7 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.48□□□□□ -0.09
PCDHGC4Q9Y5F7 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGC4Q9Y5F7 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGC4Q9Y5F7 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.48□□□□□ -0.09
PCDHGC4Q9Y5F7 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGC4Q9Y5F7 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.48□□□□□ -0.09
PCDHGC4Q9Y5F7 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGC4Q9Y5F7 AL157996.1-201ENST00000624684 2299 ntBASIC14.48□□□□□ -0.09
PCDHGC4Q9Y5F7 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGC4Q9Y5F7 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGC4Q9Y5F7 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.48□□□□□ -0.09
PCDHGC4Q9Y5F7 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.48□□□□□ -0.09
PCDHGC4Q9Y5F7 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGC4Q9Y5F7 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGC4Q9Y5F7 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGC4Q9Y5F7 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGC4Q9Y5F7 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGC4Q9Y5F7 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDHGC4Q9Y5F7 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGC4Q9Y5F7 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGC4Q9Y5F7 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.47□□□□□ -0.09
PCDHGC4Q9Y5F7 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
PCDHGC4Q9Y5F7 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGC4Q9Y5F7 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC14.47□□□□□ -0.09
PCDHGC4Q9Y5F7 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGC4Q9Y5F7 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
PCDHGC4Q9Y5F7 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGC4Q9Y5F7 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.47□□□□□ -0.09
PCDHGC4Q9Y5F7 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGC4Q9Y5F7 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGC4Q9Y5F7 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGC4Q9Y5F7 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGC4Q9Y5F7 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.47□□□□□ -0.09
PCDHGC4Q9Y5F7 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDHGC4Q9Y5F7 AC012618.1-201ENST00000461223 412 ntBASIC14.47□□□□□ -0.09
PCDHGC4Q9Y5F7 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDHGC4Q9Y5F7 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.47□□□□□ -0.09
PCDHGC4Q9Y5F7 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.47□□□□□ -0.09
PCDHGC4Q9Y5F7 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.47□□□□□ -0.09
PCDHGC4Q9Y5F7 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
PCDHGC4Q9Y5F7 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
PCDHGC4Q9Y5F7 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGC4Q9Y5F7 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDHGC4Q9Y5F7 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGC4Q9Y5F7 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGC4Q9Y5F7 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDHGC4Q9Y5F7 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.47□□□□□ -0.09
PCDHGC4Q9Y5F7 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGC4Q9Y5F7 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGC4Q9Y5F7 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGC4Q9Y5F7 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.47□□□□□ -0.09
PCDHGC4Q9Y5F7 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.47□□□□□ -0.09
PCDHGC4Q9Y5F7 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGC4Q9Y5F7 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PCDHGC4Q9Y5F7 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGC4Q9Y5F7 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC14.46□□□□□ -0.09
PCDHGC4Q9Y5F7 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
PCDHGC4Q9Y5F7 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGC4Q9Y5F7 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14.46□□□□□ -0.09
PCDHGC4Q9Y5F7 AC090643.2-201ENST00000623442 2029 ntBASIC14.46□□□□□ -0.09
PCDHGC4Q9Y5F7 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
PCDHGC4Q9Y5F7 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGC4Q9Y5F7 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGC4Q9Y5F7 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGC4Q9Y5F7 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
PCDHGC4Q9Y5F7 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGC4Q9Y5F7 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGC4Q9Y5F7 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGC4Q9Y5F7 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
PCDHGC4Q9Y5F7 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGC4Q9Y5F7 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGC4Q9Y5F7 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGC4Q9Y5F7 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGC4Q9Y5F7 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGC4Q9Y5F7 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGC4Q9Y5F7 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.46□□□□□ -0.09
PCDHGC4Q9Y5F7 RN7SL530P-201ENST00000485097 298 ntBASIC14.46□□□□□ -0.09
PCDHGC4Q9Y5F7 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC14.46□□□□□ -0.09
PCDHGC4Q9Y5F7 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.46□□□□□ -0.09
PCDHGC4Q9Y5F7 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
PCDHGC4Q9Y5F7 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGC4Q9Y5F7 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHGC4Q9Y5F7 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.46□□□□□ -0.09
PCDHGC4Q9Y5F7 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.46□□□□□ -0.09
PCDHGC4Q9Y5F7 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
PCDHGC4Q9Y5F7 AL022334.2-201ENST00000610000 484 ntBASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms