Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.22□□□□□ -0.29
LRFN1Q9P244 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
LRFN1Q9P244 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRFN1Q9P244 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
LRFN1Q9P244 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRFN1Q9P244 AC092053.3-201ENST00000641308 4975 ntBASIC13.21□□□□□ -0.29
LRFN1Q9P244 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRFN1Q9P244 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
LRFN1Q9P244 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRFN1Q9P244 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRFN1Q9P244 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRFN1Q9P244 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
LRFN1Q9P244 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC13.21□□□□□ -0.29
LRFN1Q9P244 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
LRFN1Q9P244 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LRFN1Q9P244 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LRFN1Q9P244 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRFN1Q9P244 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRFN1Q9P244 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRFN1Q9P244 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRFN1Q9P244 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
LRFN1Q9P244 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.21□□□□□ -0.29
LRFN1Q9P244 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.21□□□□□ -0.29
LRFN1Q9P244 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LRFN1Q9P244 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRFN1Q9P244 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LRFN1Q9P244 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRFN1Q9P244 MIR33B-201ENST00000385104 96 ntBASIC13.21□□□□□ -0.29
LRFN1Q9P244 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
LRFN1Q9P244 AC092580.1-201ENST00000433998 658 ntBASIC13.21□□□□□ -0.29
LRFN1Q9P244 DUTP3-201ENST00000450025 415 ntBASIC13.21□□□□□ -0.29
LRFN1Q9P244 NOC2LP1-201ENST00000450578 752 ntBASIC13.21□□□□□ -0.29
LRFN1Q9P244 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC13.21□□□□□ -0.29
LRFN1Q9P244 LY6E-208ENST00000520531 490 ntTSL 2 BASIC13.21□□□□□ -0.29
LRFN1Q9P244 CFL1-214ENST00000534769 758 ntTSL 2 BASIC13.21□□□□□ -0.29
LRFN1Q9P244 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
LRFN1Q9P244 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
LRFN1Q9P244 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC13.21□□□□□ -0.29
LRFN1Q9P244 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC13.21□□□□□ -0.29
LRFN1Q9P244 AC007326.1-201ENST00000604539 458 ntBASIC13.21□□□□□ -0.29
LRFN1Q9P244 MIR6074-201ENST00000612054 107 ntBASIC13.21□□□□□ -0.29
LRFN1Q9P244 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
LRFN1Q9P244 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC13.21□□□□□ -0.29
LRFN1Q9P244 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.21□□□□□ -0.29
LRFN1Q9P244 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRFN1Q9P244 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.21□□□□□ -0.29
LRFN1Q9P244 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRFN1Q9P244 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.21□□□□□ -0.3
LRFN1Q9P244 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
LRFN1Q9P244 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
LRFN1Q9P244 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
LRFN1Q9P244 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.21□□□□□ -0.3
LRFN1Q9P244 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LRFN1Q9P244 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
LRFN1Q9P244 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LRFN1Q9P244 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LRFN1Q9P244 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LRFN1Q9P244 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LRFN1Q9P244 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRFN1Q9P244 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.2□□□□□ -0.3
LRFN1Q9P244 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRFN1Q9P244 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRFN1Q9P244 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.2□□□□□ -0.3
LRFN1Q9P244 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRFN1Q9P244 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRFN1Q9P244 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
LRFN1Q9P244 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
LRFN1Q9P244 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRFN1Q9P244 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRFN1Q9P244 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRFN1Q9P244 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRFN1Q9P244 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRFN1Q9P244 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
LRFN1Q9P244 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRFN1Q9P244 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
LRFN1Q9P244 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.2□□□□□ -0.3
LRFN1Q9P244 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
LRFN1Q9P244 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.2□□□□□ -0.3
LRFN1Q9P244 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC13.2□□□□□ -0.3
LRFN1Q9P244 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRFN1Q9P244 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
LRFN1Q9P244 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC13.2□□□□□ -0.3
LRFN1Q9P244 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRFN1Q9P244 AL161932.2-201ENST00000435436 679 ntBASIC13.2□□□□□ -0.3
LRFN1Q9P244 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC13.2□□□□□ -0.3
LRFN1Q9P244 RPS2P36-201ENST00000456516 831 ntBASIC13.2□□□□□ -0.3
LRFN1Q9P244 AC114947.1-202ENST00000514136 344 ntBASIC13.2□□□□□ -0.3
LRFN1Q9P244 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRFN1Q9P244 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC13.2□□□□□ -0.3
LRFN1Q9P244 TPM1-223ENST00000560445 485 ntTSL 3 BASIC13.2□□□□□ -0.3
LRFN1Q9P244 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.2□□□□□ -0.3
LRFN1Q9P244 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.2□□□□□ -0.3
LRFN1Q9P244 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
LRFN1Q9P244 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRFN1Q9P244 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC13.2□□□□□ -0.3
LRFN1Q9P244 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRFN1Q9P244 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRFN1Q9P244 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRFN1Q9P244 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC13.2□□□□□ -0.3
LRFN1Q9P244 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms