Protein–RNA interactions for Protein: Q96RT7

TUBGCP6, Gamma-tubulin complex component 6, humanhuman

Predictions only

Length 1,819 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP6Q96RT7 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TUBGCP6Q96RT7 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC17.85■□□□□ 0.45
TUBGCP6Q96RT7 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TUBGCP6Q96RT7 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TUBGCP6Q96RT7 FAM226B-201ENST00000602508 1490 ntBASIC17.85■□□□□ 0.45
TUBGCP6Q96RT7 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TUBGCP6Q96RT7 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TUBGCP6Q96RT7 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TUBGCP6Q96RT7 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TUBGCP6Q96RT7 SSR4-202ENST00000370085 526 ntTSL 2 BASIC17.85■□□□□ 0.45
TUBGCP6Q96RT7 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC17.85■□□□□ 0.45
TUBGCP6Q96RT7 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC17.85■□□□□ 0.45
TUBGCP6Q96RT7 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC17.85■□□□□ 0.45
TUBGCP6Q96RT7 VENTXP4-201ENST00000449029 958 ntBASIC17.85■□□□□ 0.45
TUBGCP6Q96RT7 AL136084.1-201ENST00000449172 318 ntBASIC17.85■□□□□ 0.45
TUBGCP6Q96RT7 DPY19L2P4-201ENST00000479881 442 ntBASIC17.85■□□□□ 0.45
TUBGCP6Q96RT7 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC17.85■□□□□ 0.45
TUBGCP6Q96RT7 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TUBGCP6Q96RT7 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TUBGCP6Q96RT7 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TUBGCP6Q96RT7 AC005840.4-201ENST00000541242 2494 ntBASIC17.85■□□□□ 0.45
TUBGCP6Q96RT7 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TUBGCP6Q96RT7 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TUBGCP6Q96RT7 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC17.85■□□□□ 0.45
TUBGCP6Q96RT7 AMT-256ENST00000638063 1783 ntTSL 5 BASIC17.85■□□□□ 0.45
TUBGCP6Q96RT7 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 TCAM1P-207ENST00000485295 1537 ntBASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 MIR611-201ENST00000384869 67 ntBASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 CD44-224ENST00000526669 870 ntTSL 5 BASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 AP003040.1-201ENST00000532044 1024 ntBASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 AC073869.4-201ENST00000620841 800 ntBASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 B9D1-206ENST00000461069 923 ntTSL 2 BASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 AC100858.1-201ENST00000514059 1228 ntBASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 RN7SL121P-201ENST00000584223 273 ntBASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC17.84■□□□□ 0.45
TUBGCP6Q96RT7 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
TUBGCP6Q96RT7 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC17.83■□□□□ 0.45
TUBGCP6Q96RT7 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC17.83■□□□□ 0.45
TUBGCP6Q96RT7 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TUBGCP6Q96RT7 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.83■□□□□ 0.45
TUBGCP6Q96RT7 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC17.83■□□□□ 0.45
TUBGCP6Q96RT7 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TUBGCP6Q96RT7 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC17.83■□□□□ 0.45
TUBGCP6Q96RT7 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TUBGCP6Q96RT7 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TUBGCP6Q96RT7 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC17.83■□□□□ 0.45
TUBGCP6Q96RT7 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
TUBGCP6Q96RT7 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
TUBGCP6Q96RT7 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TUBGCP6Q96RT7 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
TUBGCP6Q96RT7 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TUBGCP6Q96RT7 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TUBGCP6Q96RT7 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TUBGCP6Q96RT7 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
TUBGCP6Q96RT7 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC17.83■□□□□ 0.44
TUBGCP6Q96RT7 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TUBGCP6Q96RT7 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC17.83■□□□□ 0.44
TUBGCP6Q96RT7 PSME2P2-201ENST00000453033 700 ntBASIC17.83■□□□□ 0.44
TUBGCP6Q96RT7 AC099328.1-201ENST00000498809 1030 ntBASIC17.83■□□□□ 0.44
TUBGCP6Q96RT7 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC17.83■□□□□ 0.44
TUBGCP6Q96RT7 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TUBGCP6Q96RT7 AC113385.2-201ENST00000614465 762 ntBASIC17.83■□□□□ 0.44
TUBGCP6Q96RT7 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC17.83■□□□□ 0.44
TUBGCP6Q96RT7 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
TUBGCP6Q96RT7 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms