Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 GSAP-205ENST00000430584 600 ntTSL 5 BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 GAPDHP21-201ENST00000450301 1010 ntBASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 AL136301.1-201ENST00000615830 422 ntBASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 WNT11-204ENST00000621122 789 ntTSL 5 BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 PFAS-212ENST00000625942 396 ntTSL 5 BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 AC011474.4-201ENST00000623523 2076 ntBASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
ZNF439Q8NDP4 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 SHC1P1-201ENST00000425230 1745 ntBASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 AL122018.1-201ENST00000446607 2310 ntBASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 AL161932.2-201ENST00000435436 679 ntBASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 HIST2H2BB-201ENST00000449108 381 ntBASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 AL162274.1-201ENST00000617191 1098 ntBASIC11.97□□□□□ -0.49
ZNF439Q8NDP4 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms