Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 AC092862.1-201ENST00000541534 533 ntBASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 AC007952.5-201ENST00000572818 1486 ntBASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.92□□□□□ -0.18
LYSMD4Q5XG99 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD4Q5XG99 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD4Q5XG99 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
LYSMD4Q5XG99 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD4Q5XG99 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD4Q5XG99 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD4Q5XG99 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.91□□□□□ -0.18
LYSMD4Q5XG99 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD4Q5XG99 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD4Q5XG99 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD4Q5XG99 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.91□□□□□ -0.18
LYSMD4Q5XG99 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC13.91□□□□□ -0.18
LYSMD4Q5XG99 PIFO-201ENST00000369737 746 ntTSL 2 BASIC13.91□□□□□ -0.18
LYSMD4Q5XG99 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD4Q5XG99 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD4Q5XG99 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
LYSMD4Q5XG99 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC13.91□□□□□ -0.18
LYSMD4Q5XG99 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
LYSMD4Q5XG99 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC13.91□□□□□ -0.18
LYSMD4Q5XG99 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC13.91□□□□□ -0.18
LYSMD4Q5XG99 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD4Q5XG99 GOLGA2P8-201ENST00000505201 779 ntBASIC13.91□□□□□ -0.18
LYSMD4Q5XG99 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
LYSMD4Q5XG99 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC13.91□□□□□ -0.18
LYSMD4Q5XG99 AC027139.1-201ENST00000565286 951 ntBASIC13.91□□□□□ -0.18
LYSMD4Q5XG99 MBP-238ENST00000580402 915 ntTSL 5 BASIC13.91□□□□□ -0.18
LYSMD4Q5XG99 TYMSP2-201ENST00000589501 424 ntBASIC13.91□□□□□ -0.18
LYSMD4Q5XG99 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC13.91□□□□□ -0.18
LYSMD4Q5XG99 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD4Q5XG99 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC13.91□□□□□ -0.18
LYSMD4Q5XG99 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
LYSMD4Q5XG99 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
LYSMD4Q5XG99 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.91□□□□□ -0.18
LYSMD4Q5XG99 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD4Q5XG99 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.91□□□□□ -0.18
LYSMD4Q5XG99 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC13.91□□□□□ -0.18
LYSMD4Q5XG99 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD4Q5XG99 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD4Q5XG99 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LYSMD4Q5XG99 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
LYSMD4Q5XG99 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD4Q5XG99 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD4Q5XG99 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC13.9□□□□□ -0.18
LYSMD4Q5XG99 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC13.9□□□□□ -0.18
LYSMD4Q5XG99 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD4Q5XG99 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD4Q5XG99 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD4Q5XG99 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD4Q5XG99 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD4Q5XG99 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
LYSMD4Q5XG99 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
LYSMD4Q5XG99 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
LYSMD4Q5XG99 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD4Q5XG99 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD4Q5XG99 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.9□□□□□ -0.18
LYSMD4Q5XG99 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.9□□□□□ -0.18
LYSMD4Q5XG99 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD4Q5XG99 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD4Q5XG99 NHP2P1-201ENST00000335274 462 ntBASIC13.9□□□□□ -0.18
LYSMD4Q5XG99 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD4Q5XG99 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD4Q5XG99 GEMIN8P4-201ENST00000380526 729 ntBASIC13.9□□□□□ -0.18
LYSMD4Q5XG99 AC103592.1-201ENST00000394513 664 ntBASIC13.9□□□□□ -0.18
LYSMD4Q5XG99 AC073210.1-201ENST00000414799 232 ntBASIC13.9□□□□□ -0.18
LYSMD4Q5XG99 FAM21EP-201ENST00000417804 985 ntBASIC13.9□□□□□ -0.18
LYSMD4Q5XG99 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC13.9□□□□□ -0.18
LYSMD4Q5XG99 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC13.9□□□□□ -0.18
LYSMD4Q5XG99 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD4Q5XG99 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC13.9□□□□□ -0.18
LYSMD4Q5XG99 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC13.9□□□□□ -0.18
LYSMD4Q5XG99 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC13.9□□□□□ -0.18
LYSMD4Q5XG99 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC13.9□□□□□ -0.18
LYSMD4Q5XG99 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD4Q5XG99 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC13.9□□□□□ -0.18
LYSMD4Q5XG99 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC13.9□□□□□ -0.18
LYSMD4Q5XG99 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC13.9□□□□□ -0.18
LYSMD4Q5XG99 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC13.9□□□□□ -0.18
LYSMD4Q5XG99 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.9□□□□□ -0.18
LYSMD4Q5XG99 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LYSMD4Q5XG99 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
LYSMD4Q5XG99 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms