Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 AC020907.1-201ENST00000616460 1350 ntBASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PRICKLE4Q2TBC4 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 RPL13AP3-202ENST00000494676 1473 ntBASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 AC239868.1-201ENST00000369385 493 ntBASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 RPS9P1-201ENST00000419943 583 ntBASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 AC099548.2-209ENST00000480264 625 ntBASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 RN7SL530P-201ENST00000485097 298 ntBASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
PRICKLE4Q2TBC4 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PRICKLE4Q2TBC4 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PRICKLE4Q2TBC4 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
PRICKLE4Q2TBC4 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.3□□□□□ -0.28
PRICKLE4Q2TBC4 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC13.3□□□□□ -0.28
PRICKLE4Q2TBC4 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
PRICKLE4Q2TBC4 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PRICKLE4Q2TBC4 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PRICKLE4Q2TBC4 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PRICKLE4Q2TBC4 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PRICKLE4Q2TBC4 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PRICKLE4Q2TBC4 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PRICKLE4Q2TBC4 AMT-256ENST00000638063 1783 ntTSL 5 BASIC13.3□□□□□ -0.28
PRICKLE4Q2TBC4 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
PRICKLE4Q2TBC4 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PRICKLE4Q2TBC4 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.3□□□□□ -0.28
PRICKLE4Q2TBC4 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PRICKLE4Q2TBC4 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PRICKLE4Q2TBC4 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PRICKLE4Q2TBC4 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
PRICKLE4Q2TBC4 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PRICKLE4Q2TBC4 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PRICKLE4Q2TBC4 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PRICKLE4Q2TBC4 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
PRICKLE4Q2TBC4 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
PRICKLE4Q2TBC4 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms