Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.68□□□□□ -0.22
SKP1P63208 MIR6787-201ENST00000616675 61 ntBASIC13.68□□□□□ -0.22
SKP1P63208 AC092299.1-201ENST00000632679 757 ntBASIC13.68□□□□□ -0.22
SKP1P63208 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SKP1P63208 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SKP1P63208 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SKP1P63208 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SKP1P63208 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SKP1P63208 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SKP1P63208 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SKP1P63208 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SKP1P63208 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SKP1P63208 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.67□□□□□ -0.22
SKP1P63208 KRT8P21-201ENST00000430398 1491 ntBASIC13.67□□□□□ -0.22
SKP1P63208 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SKP1P63208 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SKP1P63208 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.67□□□□□ -0.22
SKP1P63208 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SKP1P63208 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
SKP1P63208 TUBB8P4-201ENST00000511806 1324 ntBASIC13.67□□□□□ -0.22
SKP1P63208 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SKP1P63208 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SKP1P63208 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
SKP1P63208 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SKP1P63208 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SKP1P63208 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SKP1P63208 HNRNPA1P41-201ENST00000397777 928 ntBASIC13.67□□□□□ -0.22
SKP1P63208 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SKP1P63208 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.67□□□□□ -0.22
SKP1P63208 AC006335.1-201ENST00000445200 547 ntBASIC13.67□□□□□ -0.22
SKP1P63208 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13.67□□□□□ -0.22
SKP1P63208 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC13.67□□□□□ -0.22
SKP1P63208 SKA2-205ENST00000580541 689 ntTSL 3 BASIC13.67□□□□□ -0.22
SKP1P63208 MIR3615-201ENST00000581999 87 ntBASIC13.67□□□□□ -0.22
SKP1P63208 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.67□□□□□ -0.22
SKP1P63208 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.67□□□□□ -0.22
SKP1P63208 AL645939.5-201ENST00000606834 243 ntBASIC13.67□□□□□ -0.22
SKP1P63208 AL157813.1-201ENST00000612996 587 ntBASIC13.67□□□□□ -0.22
SKP1P63208 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13.67□□□□□ -0.22
SKP1P63208 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.67□□□□□ -0.22
SKP1P63208 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.67□□□□□ -0.22
SKP1P63208 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SKP1P63208 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.67□□□□□ -0.22
SKP1P63208 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SKP1P63208 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SKP1P63208 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SKP1P63208 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SKP1P63208 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SKP1P63208 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SKP1P63208 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.67□□□□□ -0.22
SKP1P63208 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SKP1P63208 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SKP1P63208 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SKP1P63208 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.67□□□□□ -0.22
SKP1P63208 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SKP1P63208 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SKP1P63208 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SKP1P63208 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SKP1P63208 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SKP1P63208 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SKP1P63208 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SKP1P63208 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.66□□□□□ -0.22
SKP1P63208 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SKP1P63208 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SKP1P63208 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
SKP1P63208 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
SKP1P63208 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SKP1P63208 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SKP1P63208 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
SKP1P63208 AC005089.1-201ENST00000619486 2241 ntBASIC13.66□□□□□ -0.22
SKP1P63208 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.66□□□□□ -0.22
SKP1P63208 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SKP1P63208 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SKP1P63208 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SKP1P63208 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SKP1P63208 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SKP1P63208 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC13.66□□□□□ -0.22
SKP1P63208 FNTAP2-201ENST00000430308 634 ntBASIC13.66□□□□□ -0.22
SKP1P63208 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
SKP1P63208 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC13.66□□□□□ -0.22
SKP1P63208 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.66□□□□□ -0.22
SKP1P63208 POU5F1P2-201ENST00000521750 823 ntBASIC13.66□□□□□ -0.22
SKP1P63208 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.66□□□□□ -0.22
SKP1P63208 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC13.66□□□□□ -0.22
SKP1P63208 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.66□□□□□ -0.22
SKP1P63208 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
SKP1P63208 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SKP1P63208 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SKP1P63208 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SKP1P63208 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.66□□□□□ -0.22
SKP1P63208 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SKP1P63208 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.66□□□□□ -0.22
SKP1P63208 AC020910.6-201ENST00000623084 1459 ntBASIC13.66□□□□□ -0.22
SKP1P63208 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SKP1P63208 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SKP1P63208 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
SKP1P63208 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SKP1P63208 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SKP1P63208 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SKP1P63208 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms