Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
HIST1H2BDP58876 SLC13A2-202ENST00000444914 2855 ntTSL 2 BASIC10.74□□□□□ -0.69
HIST1H2BDP58876 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
HIST1H2BDP58876 GDPD2-205ENST00000538649 2067 ntTSL 2 BASIC10.74□□□□□ -0.69
HIST1H2BDP58876 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
HIST1H2BDP58876 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
HIST1H2BDP58876 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
HIST1H2BDP58876 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
HIST1H2BDP58876 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
HIST1H2BDP58876 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC10.74□□□□□ -0.69
HIST1H2BDP58876 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
HIST1H2BDP58876 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
HIST1H2BDP58876 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
HIST1H2BDP58876 CXCL1P1-201ENST00000502804 216 ntBASIC10.74□□□□□ -0.69
HIST1H2BDP58876 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
HIST1H2BDP58876 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC10.74□□□□□ -0.69
HIST1H2BDP58876 RPS15-202ENST00000585665 467 ntTSL 3 BASIC10.74□□□□□ -0.69
HIST1H2BDP58876 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
HIST1H2BDP58876 GPR39-203ENST00000622084 900 ntTSL 5 BASIC10.74□□□□□ -0.69
HIST1H2BDP58876 CR392039.2-201ENST00000623182 509 ntBASIC10.74□□□□□ -0.69
HIST1H2BDP58876 FBXO9-202ENST00000323557 3418 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
HIST1H2BDP58876 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC10.74□□□□□ -0.69
HIST1H2BDP58876 DCLRE1C-210ENST00000378289 3532 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
HIST1H2BDP58876 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
HIST1H2BDP58876 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
HIST1H2BDP58876 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
HIST1H2BDP58876 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
HIST1H2BDP58876 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC10.74□□□□□ -0.69
HIST1H2BDP58876 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
HIST1H2BDP58876 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
HIST1H2BDP58876 ENDOU-201ENST00000229003 2332 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
HIST1H2BDP58876 DDB2-201ENST00000256996 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
HIST1H2BDP58876 ZSCAN21-205ENST00000543588 1870 ntTSL 2 BASIC10.74□□□□□ -0.69
HIST1H2BDP58876 SHOX-203ENST00000381578 3757 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
HIST1H2BDP58876 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
HIST1H2BDP58876 NEFM-204ENST00000518131 2500 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
HIST1H2BDP58876 ATAT1-202ENST00000319027 2061 ntTSL 2 BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 PJA1-204ENST00000374584 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 ERBB2-203ENST00000445658 3238 ntTSL 2 BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 MSH6-215ENST00000622629 4324 ntTSL 5 BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 SALL4P6-201ENST00000429385 1691 ntBASIC10.73□□□□□ -0.69
HIST1H2BDP58876 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 CORO7-202ENST00000537233 3392 ntTSL 2 BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 PAFAH1B2-204ENST00000527958 4198 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 TRPC7-203ENST00000502753 2424 ntTSL 5 BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 LINC02228-202ENST00000641261 2489 ntBASIC10.73□□□□□ -0.69
HIST1H2BDP58876 CCNA1-201ENST00000255465 1879 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 TMED7-201ENST00000456936 3757 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 RTN3-203ENST00000341307 2524 ntTSL 2 BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 PMS2P2-201ENST00000425039 1128 ntBASIC10.73□□□□□ -0.69
HIST1H2BDP58876 HLA-K-203ENST00000430151 1046 ntBASIC10.73□□□□□ -0.69
HIST1H2BDP58876 TARDBPP1-201ENST00000442013 1203 ntBASIC10.73□□□□□ -0.69
HIST1H2BDP58876 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 AC026979.3-201ENST00000607315 403 ntBASIC10.73□□□□□ -0.69
HIST1H2BDP58876 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 LINC01544-201ENST00000567801 5168 ntTSL 2 BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 IGSF9-201ENST00000361509 3996 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 MRPL37P1-201ENST00000592451 1337 ntBASIC10.73□□□□□ -0.69
HIST1H2BDP58876 AGAP6-203ENST00000618025 2690 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 AL592528.1-201ENST00000380008 3466 ntTSL 2 BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 FAM222B-209ENST00000581407 4161 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 SYS1-201ENST00000243918 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 POLR3E-201ENST00000299853 3697 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 TAF5L-204ENST00000366676 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 AL713866.1-201ENST00000563320 3125 ntBASIC10.73□□□□□ -0.69
HIST1H2BDP58876 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 RPS6KA1-220ENST00000531382 2359 ntTSL 2 BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
HIST1H2BDP58876 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
HIST1H2BDP58876 SV2A-202ENST00000369146 4416 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms