RNA–Protein interactions for RNA: ENST00000374584.3

PJA1-204, Transcript of praja ring finger ubiquitin ligase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PJA1, Length 2,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PJA1-204ENST00000374584 NISCHQ9Y2I1 1504 aa23.72■■□□□ 1.39
PJA1-204ENST00000374584 SHROOM4Q9ULL8 1493 aa20.63■□□□□ 0.89
PJA1-204ENST00000374584 HRCP23327 699 aa20.61■□□□□ 0.89
PJA1-204ENST00000374584 SUPT5HO00267 1087 aaKnown RBP20.47■□□□□ 0.87
PJA1-204ENST00000374584 MYO15BQ96JP2 1530 aa20.39■□□□□ 0.85
PJA1-204ENST00000374584 CHIC1Q5VXU3 224 aa20.23■□□□□ 0.83
PJA1-204ENST00000374584 ZCCHC6Q5VYS8 1495 aaKnown RBP20.2■□□□□ 0.82
PJA1-204ENST00000374584 PCGF6Q9BYE7 350 aa20.16■□□□□ 0.82
PJA1-204ENST00000374584 PPARGC1BQ86YN6 1023 aaKnown RBP20.11■□□□□ 0.81
PJA1-204ENST00000374584 DCAF1Q9Y4B6 1507 aa19.97■□□□□ 0.79
PJA1-204ENST00000374584 CCDC180Q9P1Z9 1646 aa19.88■□□□□ 0.77
PJA1-204ENST00000374584 LOC105371045A0A1W2PR82 267 aa19.66■□□□□ 0.74
PJA1-204ENST00000374584 TRIM26Q12899 539 aaPredicted RBP19.64■□□□□ 0.73
PJA1-204ENST00000374584 PELP1Q8IZL8 1130 aaKnown RBP19.61■□□□□ 0.73
PJA1-204ENST00000374584 ZEB1P37275 1124 aaPredicted RBP19.43■□□□□ 0.7
PJA1-204ENST00000374584 DCAF8L2P0C7V8 631 aa19.4■□□□□ 0.7
PJA1-204ENST00000374584 SCAF1Q9H7N4 1312 aaKnown RBP19.38■□□□□ 0.69
PJA1-204ENST00000374584 ABCC9O60706 1549 aa19.18■□□□□ 0.66
PJA1-204ENST00000374584 RSF1Q96T23 1441 aaPredicted RBP19■□□□□ 0.63
PJA1-204ENST00000374584 TRIM41Q8WV44 630 aa19■□□□□ 0.63
PJA1-204ENST00000374584 ACIN1Q9UKV3 1341 aaKnown RBP18.96■□□□□ 0.63
PJA1-204ENST00000374584 RB1CC1Q8TDY2 1594 aa18.93■□□□□ 0.62
PJA1-204ENST00000374584 NEUROD1Q13562 356 aa18.9■□□□□ 0.62
PJA1-204ENST00000374584 FAM9AQ8IZU1 332 aaPredicted RBP18.89■□□□□ 0.61
PJA1-204ENST00000374584 MYT1Q01538 1121 aa18.79■□□□□ 0.6
PJA1-204ENST00000374584 SCRIBQ14160 1630 aa18.75■□□□□ 0.59
PJA1-204ENST00000374584 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.75■□□□□ 0.59
PJA1-204ENST00000374584 GTF3C3Q9Y5Q9 886 aa18.74■□□□□ 0.59
PJA1-204ENST00000374584 EHMT2Q96KQ7 1210 aa18.71■□□□□ 0.59
PJA1-204ENST00000374584 DIEXFQ68CQ4 756 aaKnown RBP18.69■□□□□ 0.58
PJA1-204ENST00000374584 CCER1Q8TC90 406 aaPredicted RBP18.69■□□□□ 0.58
PJA1-204ENST00000374584 CENPBP07199 599 aaPredicted RBP18.68■□□□□ 0.58
PJA1-204ENST00000374584 EIF4G1Q04637 1599 aaKnown RBP18.5■□□□□ 0.55
PJA1-204ENST00000374584 CECR2Q9BXF3 1484 aa18.5■□□□□ 0.55
PJA1-204ENST00000374584 WRNQ14191 1432 aaPredicted RBP eCLIP18.5■□□□□ 0.55
PJA1-204ENST00000374584 MROH2BQ7Z745 1585 aa18.5■□□□□ 0.55
PJA1-204ENST00000374584 WIZO95785 1651 aa18.43■□□□□ 0.54
PJA1-204ENST00000374584 ZNF316A6NFI3 1004 aaPredicted RBP18.4■□□□□ 0.54
PJA1-204ENST00000374584 BAZ1AQ9NRL2 1556 aaPredicted RBP18.36■□□□□ 0.53
PJA1-204ENST00000374584 CEP162Q5TB80 1403 aa18.34■□□□□ 0.53
PJA1-204ENST00000374584 TTBK1Q5TCY1 1321 aaPredicted RBP18.27■□□□□ 0.52
PJA1-204ENST00000374584 YTHDC1Q96MU7 727 aaKnown RBP18.26■□□□□ 0.51
PJA1-204ENST00000374584 CCDC88BA6NC98 1476 aa18.26■□□□□ 0.51
PJA1-204ENST00000374584 TNIKQ9UKE5 1360 aa18.25■□□□□ 0.51
PJA1-204ENST00000374584 MIER1Q8N108 512 aa18.23■□□□□ 0.51
PJA1-204ENST00000374584 ABCC8Q09428 1581 aa18.23■□□□□ 0.51
PJA1-204ENST00000374584 NACADO15069 1562 aa18.22■□□□□ 0.51
PJA1-204ENST00000374584 SOGA1O94964 1423 aa18.16■□□□□ 0.5
PJA1-204ENST00000374584 TOP2AP11388 1531 aaKnown RBP18.11■□□□□ 0.49
PJA1-204ENST00000374584 EEA1Q15075 1411 aa18.11■□□□□ 0.49
PJA1-204ENST00000374584 RUSC2Q8N2Y8 1516 aa18.07■□□□□ 0.48
PJA1-204ENST00000374584 SMARCA2P51531 1590 aa18.06■□□□□ 0.48
PJA1-204ENST00000374584 CSRNP3Q8WYN3 585 aa18.05■□□□□ 0.48
PJA1-204ENST00000374584 GOLGA3Q08378 1498 aa18.04■□□□□ 0.48
PJA1-204ENST00000374584 UBTFP17480 764 aaKnown RBP18■□□□□ 0.47
PJA1-204ENST00000374584 HNRNPUL2Q1KMD3 747 aaKnown RBP17.98■□□□□ 0.47
PJA1-204ENST00000374584 CLSPNQ9HAW4 1339 aa17.97■□□□□ 0.47
PJA1-204ENST00000374584 SMARCA4P51532 1647 aa17.96■□□□□ 0.46
PJA1-204ENST00000374584 SUPT16HQ9Y5B9 1047 aaKnown RBP17.93■□□□□ 0.46
PJA1-204ENST00000374584 KIF21BO75037 1637 aa17.89■□□□□ 0.45
PJA1-204ENST00000374584 VPS8Q8N3P4 1428 aa17.87■□□□□ 0.45
PJA1-204ENST00000374584 CEP164Q9UPV0 1460 aa17.87■□□□□ 0.45
PJA1-204ENST00000374584 CLIP1P30622 1438 aa17.86■□□□□ 0.45
PJA1-204ENST00000374584 TSHZ2Q9NRE2 1034 aa17.82■□□□□ 0.44
PJA1-204ENST00000374584 DHX57Q6P158 1386 aaKnown RBP17.78■□□□□ 0.44
PJA1-204ENST00000374584 ANP32EQ9BTT0 268 aa17.77■□□□□ 0.43
PJA1-204ENST00000374584 BAZ1BQ9UIG0 1483 aaKnown RBP17.76■□□□□ 0.43
PJA1-204ENST00000374584 SYNJ1O43426 1573 aa17.75■□□□□ 0.43
PJA1-204ENST00000374584 RAPGEF2Q9Y4G8 1499 aa17.7■□□□□ 0.42
PJA1-204ENST00000374584 APLP2Q06481 763 aa17.68■□□□□ 0.42
PJA1-204ENST00000374584 UNC13AQ9UPW8 1703 aa17.65■□□□□ 0.42
PJA1-204ENST00000374584 BCL11AQ9H165 835 aa17.59■□□□□ 0.41
PJA1-204ENST00000374584 PEG3Q9GZU2 1588 aa17.59■□□□□ 0.41
PJA1-204ENST00000374584 CUX2O14529 1486 aa17.59■□□□□ 0.41
PJA1-204ENST00000374584 RRBP1Q9P2E9 1410 aaKnown RBP17.57■□□□□ 0.4
PJA1-204ENST00000374584 ARAP1Q96P48 1450 aa17.55■□□□□ 0.4
PJA1-204ENST00000374584 KCNH8Q96L42 1107 aa17.54■□□□□ 0.4
PJA1-204ENST00000374584 KANK4Q5T7N3 995 aaPredicted RBP17.51■□□□□ 0.39
PJA1-204ENST00000374584 RANGAP1P46060 587 aaPredicted RBP17.49■□□□□ 0.39
PJA1-204ENST00000374584 ERICH3Q5RHP9 1530 aa17.49■□□□□ 0.39
PJA1-204ENST00000374584 TOP2BQ02880 1626 aa17.46■□□□□ 0.39
PJA1-204ENST00000374584 PRXQ9BXM0 1461 aa17.45■□□□□ 0.38
PJA1-204ENST00000374584 BCANQ96GW7 911 aa17.45■□□□□ 0.38
PJA1-204ENST00000374584 MAPKBP1O60336 1514 aa17.45■□□□□ 0.38
PJA1-204ENST00000374584 FKBP8Q14318 412 aa17.43■□□□□ 0.38
PJA1-204ENST00000374584 CCNB3Q8WWL7 1395 aa17.41■□□□□ 0.38
PJA1-204ENST00000374584 BIVM-ERCC5R4GMW8 1640 aa17.39■□□□□ 0.38
PJA1-204ENST00000374584 RBM19Q9Y4C8 960 aaKnown RBP17.39■□□□□ 0.38
PJA1-204ENST00000374584 BICRAQ9NZM4 1560 aa17.38■□□□□ 0.37
PJA1-204ENST00000374584 RAB3GAP2Q9H2M9 1393 aa17.35■□□□□ 0.37
PJA1-204ENST00000374584 ATAD2BQ9ULI0 1458 aa17.34■□□□□ 0.37
PJA1-204ENST00000374584 WDR97A6NE52 1622 aa17.33■□□□□ 0.36
PJA1-204ENST00000374584 PPP1R15AO75807 674 aaPredicted RBP17.3■□□□□ 0.36
PJA1-204ENST00000374584 DDX10Q13206 875 aaKnown RBP17.3■□□□□ 0.36
PJA1-204ENST00000374584 ARHGAP35Q9NRY4 1499 aa17.29■□□□□ 0.36
PJA1-204ENST00000374584 NEFLP07196 543 aa17.26■□□□□ 0.35
PJA1-204ENST00000374584 MSH5O43196 834 aa17.26■□□□□ 0.35
PJA1-204ENST00000374584 CCER2I3L3R5 266 aa17.25■□□□□ 0.35
PJA1-204ENST00000374584 ITGAEP38570 1179 aa17.25■□□□□ 0.35
PJA1-204ENST00000374584 PABPN1Q86U42 306 aaKnown RBP eCLIP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms