Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ATXN3P54252 AC084364.1-201ENST00000551967 1556 ntBASIC14.81□□□□□ -0.04
ATXN3P54252 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
ATXN3P54252 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
ATXN3P54252 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ATXN3P54252 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ATXN3P54252 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.81□□□□□ -0.04
ATXN3P54252 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ATXN3P54252 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ATXN3P54252 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
ATXN3P54252 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
ATXN3P54252 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATXN3P54252 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.8□□□□□ -0.04
ATXN3P54252 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATXN3P54252 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
ATXN3P54252 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
ATXN3P54252 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ATXN3P54252 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
ATXN3P54252 AP000845.1-201ENST00000581677 2131 ntBASIC14.8□□□□□ -0.04
ATXN3P54252 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATXN3P54252 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATXN3P54252 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATXN3P54252 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATXN3P54252 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATXN3P54252 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.8□□□□□ -0.04
ATXN3P54252 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATXN3P54252 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATXN3P54252 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ATXN3P54252 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ATXN3P54252 RN7SKP214-201ENST00000364208 315 ntBASIC14.8□□□□□ -0.04
ATXN3P54252 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATXN3P54252 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC14.8□□□□□ -0.04
ATXN3P54252 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
ATXN3P54252 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC14.8□□□□□ -0.04
ATXN3P54252 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC14.8□□□□□ -0.04
ATXN3P54252 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
ATXN3P54252 FAM58BP-201ENST00000439056 645 ntBASIC14.8□□□□□ -0.04
ATXN3P54252 PUDPP3-201ENST00000445368 636 ntBASIC14.8□□□□□ -0.04
ATXN3P54252 FGFR3P1-201ENST00000449999 601 ntBASIC14.8□□□□□ -0.04
ATXN3P54252 RN7SL8P-201ENST00000461771 266 ntBASIC14.8□□□□□ -0.04
ATXN3P54252 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC14.8□□□□□ -0.04
ATXN3P54252 PGAM1P5-201ENST00000548011 764 ntBASIC14.8□□□□□ -0.04
ATXN3P54252 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ATXN3P54252 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.8□□□□□ -0.04
ATXN3P54252 RN7SL736P-201ENST00000613111 269 ntBASIC14.8□□□□□ -0.04
ATXN3P54252 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
ATXN3P54252 AC068587.8-201ENST00000641239 219 ntBASIC14.8□□□□□ -0.04
ATXN3P54252 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
ATXN3P54252 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.8□□□□□ -0.04
ATXN3P54252 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATXN3P54252 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATXN3P54252 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
ATXN3P54252 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
ATXN3P54252 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
ATXN3P54252 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.8□□□□□ -0.04
ATXN3P54252 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ATXN3P54252 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
ATXN3P54252 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATXN3P54252 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.8□□□□□ -0.04
ATXN3P54252 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
ATXN3P54252 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATXN3P54252 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ATXN3P54252 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATXN3P54252 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATXN3P54252 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.8□□□□□ -0.04
ATXN3P54252 AC089987.1-201ENST00000551654 2209 ntBASIC14.8□□□□□ -0.04
ATXN3P54252 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATXN3P54252 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATXN3P54252 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ATXN3P54252 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
ATXN3P54252 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATXN3P54252 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATXN3P54252 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATXN3P54252 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
ATXN3P54252 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
ATXN3P54252 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATXN3P54252 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATXN3P54252 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
ATXN3P54252 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATXN3P54252 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
ATXN3P54252 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATXN3P54252 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATXN3P54252 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
ATXN3P54252 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATXN3P54252 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATXN3P54252 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ATXN3P54252 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATXN3P54252 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.79□□□□□ -0.04
ATXN3P54252 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATXN3P54252 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.79□□□□□ -0.04
ATXN3P54252 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.79□□□□□ -0.04
ATXN3P54252 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
ATXN3P54252 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC14.79□□□□□ -0.04
ATXN3P54252 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
ATXN3P54252 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.79□□□□□ -0.04
ATXN3P54252 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC14.79□□□□□ -0.04
ATXN3P54252 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATXN3P54252 AC098935.1-201ENST00000446057 611 ntBASIC14.79□□□□□ -0.04
ATXN3P54252 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATXN3P54252 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms