Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM23P36406 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TRIM23P36406 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
TRIM23P36406 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM23P36406 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM23P36406 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.09□□□□□ -0.15
TRIM23P36406 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.09□□□□□ -0.15
TRIM23P36406 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM23P36406 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TRIM23P36406 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM23P36406 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
TRIM23P36406 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
TRIM23P36406 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRIM23P36406 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
TRIM23P36406 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.08□□□□□ -0.15
TRIM23P36406 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRIM23P36406 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC14.08□□□□□ -0.15
TRIM23P36406 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM23P36406 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM23P36406 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TRIM23P36406 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM23P36406 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM23P36406 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.08□□□□□ -0.16
TRIM23P36406 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.08□□□□□ -0.16
TRIM23P36406 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC14.08□□□□□ -0.16
TRIM23P36406 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC14.08□□□□□ -0.16
TRIM23P36406 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM23P36406 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM23P36406 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM23P36406 USP17L6P-201ENST00000382470 1197 ntBASIC14.08□□□□□ -0.16
TRIM23P36406 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM23P36406 AC006987.1-201ENST00000413610 527 ntBASIC14.08□□□□□ -0.16
TRIM23P36406 AL627422.1-201ENST00000434104 580 ntBASIC14.08□□□□□ -0.16
TRIM23P36406 HLA-DPB2-205ENST00000435074 1188 ntBASIC14.08□□□□□ -0.16
TRIM23P36406 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC14.08□□□□□ -0.16
TRIM23P36406 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC14.08□□□□□ -0.16
TRIM23P36406 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC14.08□□□□□ -0.16
TRIM23P36406 RPL18AP8-201ENST00000486071 528 ntBASIC14.08□□□□□ -0.16
TRIM23P36406 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC14.08□□□□□ -0.16
TRIM23P36406 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC14.08□□□□□ -0.16
TRIM23P36406 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
TRIM23P36406 MIR4706-201ENST00000582134 82 ntBASIC14.08□□□□□ -0.16
TRIM23P36406 MIR4522-201ENST00000584932 87 ntBASIC14.08□□□□□ -0.16
TRIM23P36406 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC14.08□□□□□ -0.16
TRIM23P36406 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC14.08□□□□□ -0.16
TRIM23P36406 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM23P36406 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC14.08□□□□□ -0.16
TRIM23P36406 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM23P36406 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM23P36406 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
TRIM23P36406 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM23P36406 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM23P36406 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM23P36406 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.08□□□□□ -0.16
TRIM23P36406 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.08□□□□□ -0.16
TRIM23P36406 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.08□□□□□ -0.16
TRIM23P36406 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM23P36406 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TRIM23P36406 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
TRIM23P36406 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.08□□□□□ -0.16
TRIM23P36406 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM23P36406 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM23P36406 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIM23P36406 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
TRIM23P36406 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC14.08□□□□□ -0.16
TRIM23P36406 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.08□□□□□ -0.16
TRIM23P36406 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.08□□□□□ -0.16
TRIM23P36406 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TRIM23P36406 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.07□□□□□ -0.16
TRIM23P36406 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC14.07□□□□□ -0.16
TRIM23P36406 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM23P36406 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM23P36406 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM23P36406 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.07□□□□□ -0.16
TRIM23P36406 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM23P36406 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRIM23P36406 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.07□□□□□ -0.16
TRIM23P36406 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM23P36406 AC067931.2-201ENST00000623655 2003 ntBASIC14.07□□□□□ -0.16
TRIM23P36406 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TRIM23P36406 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM23P36406 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM23P36406 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC14.07□□□□□ -0.16
TRIM23P36406 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM23P36406 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRIM23P36406 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM23P36406 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.07□□□□□ -0.16
TRIM23P36406 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM23P36406 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM23P36406 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM23P36406 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM23P36406 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM23P36406 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC14.07□□□□□ -0.16
TRIM23P36406 BX679664.3-201ENST00000414070 555 ntBASIC14.07□□□□□ -0.16
TRIM23P36406 CHCHD2P9-201ENST00000461726 456 ntBASIC14.07□□□□□ -0.16
TRIM23P36406 AC113935.1-201ENST00000471722 555 ntBASIC14.07□□□□□ -0.16
TRIM23P36406 RN7SL81P-201ENST00000493781 261 ntBASIC14.07□□□□□ -0.16
TRIM23P36406 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC14.07□□□□□ -0.16
TRIM23P36406 FOS-204ENST00000554617 796 ntTSL 2 BASIC14.07□□□□□ -0.16
TRIM23P36406 MIR4722-201ENST00000578292 60 ntBASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms