Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RB1P06400 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RB1P06400 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.02□□□□□ -0.01
RB1P06400 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RB1P06400 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.02□□□□□ -0.01
RB1P06400 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RB1P06400 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
RB1P06400 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RB1P06400 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
RB1P06400 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RB1P06400 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RB1P06400 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RB1P06400 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
RB1P06400 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.02□□□□□ -0.01
RB1P06400 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RB1P06400 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RB1P06400 AC013268.4-201ENST00000637413 2228 ntBASIC15.01□□□□□ -0.01
RB1P06400 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RB1P06400 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.01□□□□□ -0.01
RB1P06400 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
RB1P06400 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC15.01□□□□□ -0.01
RB1P06400 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RB1P06400 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RB1P06400 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RB1P06400 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RB1P06400 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RB1P06400 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RB1P06400 AL365209.1-201ENST00000624418 6473 ntBASIC15.01□□□□□ -0.01
RB1P06400 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RB1P06400 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC15.01□□□□□ -0.01
RB1P06400 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RB1P06400 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RB1P06400 GEMIN8P4-201ENST00000380526 729 ntBASIC15.01□□□□□ -0.01
RB1P06400 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RB1P06400 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RB1P06400 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC15.01□□□□□ -0.01
RB1P06400 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC15.01□□□□□ -0.01
RB1P06400 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC15.01□□□□□ -0.01
RB1P06400 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC15.01□□□□□ -0.01
RB1P06400 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
RB1P06400 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC15.01□□□□□ -0.01
RB1P06400 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC15.01□□□□□ -0.01
RB1P06400 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC15.01□□□□□ -0.01
RB1P06400 TP53-221ENST00000615910 1149 ntTSL 5 BASIC15.01□□□□□ -0.01
RB1P06400 AC073869.4-201ENST00000620841 800 ntBASIC15.01□□□□□ -0.01
RB1P06400 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC15.01□□□□□ -0.01
RB1P06400 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RB1P06400 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.01□□□□□ -0.01
RB1P06400 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RB1P06400 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RB1P06400 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RB1P06400 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RB1P06400 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RB1P06400 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
RB1P06400 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RB1P06400 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RB1P06400 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RB1P06400 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.01□□□□□ -0.01
RB1P06400 KRT8P43-201ENST00000406052 1458 ntBASIC15.01□□□□□ -0.01
RB1P06400 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RB1P06400 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RB1P06400 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.01□□□□□ -0.01
RB1P06400 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
RB1P06400 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC15□□□□□ -0.01
RB1P06400 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15□□□□□ -0.01
RB1P06400 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
RB1P06400 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RB1P06400 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RB1P06400 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RB1P06400 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC15□□□□□ -0.01
RB1P06400 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RB1P06400 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
RB1P06400 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RB1P06400 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC15□□□□□ -0.01
RB1P06400 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
RB1P06400 ACTBP14-201ENST00000411655 1089 ntBASIC15□□□□□ -0.01
RB1P06400 AC092570.1-201ENST00000414446 469 ntBASIC15□□□□□ -0.01
RB1P06400 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC15□□□□□ -0.01
RB1P06400 AL080243.1-201ENST00000423293 1060 ntBASIC15□□□□□ -0.01
RB1P06400 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC15□□□□□ -0.01
RB1P06400 NRADDP-201ENST00000437305 691 ntBASIC15□□□□□ -0.01
RB1P06400 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC15□□□□□ -0.01
RB1P06400 AC087203.1-201ENST00000532111 1181 ntBASIC15□□□□□ -0.01
RB1P06400 AC018846.1-201ENST00000568231 183 ntBASIC15□□□□□ -0.01
RB1P06400 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
RB1P06400 RN7SL556P-201ENST00000582856 298 ntBASIC15□□□□□ -0.01
RB1P06400 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC15□□□□□ -0.01
RB1P06400 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC15□□□□□ -0.01
RB1P06400 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RB1P06400 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15□□□□□ -0.01
RB1P06400 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RB1P06400 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15□□□□□ -0.01
RB1P06400 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
RB1P06400 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RB1P06400 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
RB1P06400 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
RB1P06400 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15□□□□□ -0.01
RB1P06400 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15□□□□□ -0.01
RB1P06400 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
RB1P06400 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms