Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC13.12□□□□□ -0.31
P04436 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC13.12□□□□□ -0.31
P04436 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC13.12□□□□□ -0.31
P04436 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04436 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04436 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.12□□□□□ -0.31
P04436 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.12□□□□□ -0.31
P04436 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.12□□□□□ -0.31
P04436 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
P04436 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04436 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04436 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
P04436 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
P04436 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC13.12□□□□□ -0.31
P04436 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04436 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC13.12□□□□□ -0.31
P04436 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
P04436 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04436 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04436 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04436 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04436 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04436 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04436 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04436 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
P04436 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
P04436 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04436 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P04436 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
P04436 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
P04436 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
P04436 CCT8L1P-201ENST00000465400 1674 ntBASIC13.12□□□□□ -0.31
P04436 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04436 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
P04436 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
P04436 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.11□□□□□ -0.31
P04436 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04436 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.11□□□□□ -0.31
P04436 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04436 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.11□□□□□ -0.31
P04436 AP001267.2-201ENST00000532619 2086 ntBASIC13.11□□□□□ -0.31
P04436 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04436 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.11□□□□□ -0.31
P04436 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
P04436 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
P04436 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC13.11□□□□□ -0.31
P04436 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04436 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04436 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC13.11□□□□□ -0.31
P04436 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04436 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
P04436 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
P04436 KRT17P5-201ENST00000332088 839 ntBASIC13.11□□□□□ -0.31
P04436 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
P04436 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
P04436 RPS9P1-201ENST00000419943 583 ntBASIC13.11□□□□□ -0.31
P04436 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
P04436 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC13.11□□□□□ -0.31
P04436 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC13.11□□□□□ -0.31
P04436 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.11□□□□□ -0.31
P04436 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC13.11□□□□□ -0.31
P04436 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
P04436 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC13.11□□□□□ -0.31
P04436 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC13.11□□□□□ -0.31
P04436 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04436 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC13.11□□□□□ -0.31
P04436 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC13.11□□□□□ -0.31
P04436 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.11□□□□□ -0.31
P04436 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
P04436 FOS-206ENST00000555347 1280 ntTSL 2 BASIC13.11□□□□□ -0.31
P04436 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.11□□□□□ -0.31
P04436 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
P04436 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC13.11□□□□□ -0.31
P04436 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC13.11□□□□□ -0.31
P04436 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
P04436 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04436 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.11□□□□□ -0.31
P04436 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04436 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04436 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
P04436 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.11□□□□□ -0.31
P04436 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
P04436 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
P04436 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
P04436 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04436 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04436 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.11□□□□□ -0.31
P04436 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04436 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.11□□□□□ -0.31
P04436 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
P04436 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
P04436 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04436 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.11□□□□□ -0.31
P04436 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
P04436 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04436 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04436 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04436 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P04436 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
P04436 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms