Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CHL1O00533 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
CHL1O00533 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHL1O00533 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHL1O00533 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHL1O00533 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHL1O00533 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC18.2■□□□□ 0.5
CHL1O00533 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHL1O00533 AC015909.5-201ENST00000624336 2266 ntBASIC18.2■□□□□ 0.5
CHL1O00533 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CHL1O00533 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHL1O00533 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHL1O00533 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CHL1O00533 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CHL1O00533 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHL1O00533 SNX18-202ENST00000343017 3140 ntBASIC18.2■□□□□ 0.5
CHL1O00533 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHL1O00533 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHL1O00533 NME4-203ENST00000397722 1232 ntTSL 2 BASIC18.2■□□□□ 0.5
CHL1O00533 HIST2H2BA-201ENST00000412169 381 ntBASIC18.2■□□□□ 0.5
CHL1O00533 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC18.2■□□□□ 0.5
CHL1O00533 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHL1O00533 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC18.2■□□□□ 0.5
CHL1O00533 OR5BD1P-201ENST00000532527 817 ntBASIC18.2■□□□□ 0.5
CHL1O00533 IQSEC3P1-201ENST00000538799 536 ntBASIC18.2■□□□□ 0.5
CHL1O00533 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CHL1O00533 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CHL1O00533 COX6A1P2-201ENST00000620597 330 ntBASIC18.2■□□□□ 0.5
CHL1O00533 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC18.2■□□□□ 0.5
CHL1O00533 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHL1O00533 AC008620.2-201ENST00000510294 1569 ntBASIC18.2■□□□□ 0.5
CHL1O00533 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHL1O00533 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC18.2■□□□□ 0.5
CHL1O00533 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CHL1O00533 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC18.2■□□□□ 0.5
CHL1O00533 TUBB4AP1-201ENST00000450755 1325 ntBASIC18.2■□□□□ 0.5
CHL1O00533 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHL1O00533 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHL1O00533 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC18.2■□□□□ 0.5
CHL1O00533 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHL1O00533 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHL1O00533 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CHL1O00533 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHL1O00533 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHL1O00533 GOLGA8IP-202ENST00000611635 2100 ntBASIC18.19■□□□□ 0.5
CHL1O00533 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHL1O00533 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC18.19■□□□□ 0.5
CHL1O00533 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHL1O00533 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
CHL1O00533 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHL1O00533 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHL1O00533 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHL1O00533 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHL1O00533 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC18.19■□□□□ 0.5
CHL1O00533 RN7SL564P-201ENST00000496309 250 ntBASIC18.19■□□□□ 0.5
CHL1O00533 RNA5SP417-201ENST00000516459 108 ntBASIC18.19■□□□□ 0.5
CHL1O00533 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHL1O00533 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC18.19■□□□□ 0.5
CHL1O00533 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC18.19■□□□□ 0.5
CHL1O00533 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC18.19■□□□□ 0.5
CHL1O00533 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC18.19■□□□□ 0.5
CHL1O00533 AC011491.1-203ENST00000637688 543 ntBASIC18.19■□□□□ 0.5
CHL1O00533 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
CHL1O00533 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHL1O00533 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC18.19■□□□□ 0.5
CHL1O00533 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHL1O00533 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHL1O00533 AC061965.1-201ENST00000560524 1465 ntBASIC18.19■□□□□ 0.5
CHL1O00533 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CHL1O00533 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHL1O00533 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC18.18■□□□□ 0.5
CHL1O00533 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHL1O00533 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CHL1O00533 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHL1O00533 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHL1O00533 AGAP10P-201ENST00000454844 2418 ntBASIC18.18■□□□□ 0.5
CHL1O00533 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC18.18■□□□□ 0.5
CHL1O00533 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHL1O00533 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
CHL1O00533 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC18.18■□□□□ 0.5
CHL1O00533 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHL1O00533 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC18.18■□□□□ 0.5
CHL1O00533 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC18.18■□□□□ 0.5
CHL1O00533 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC18.18■□□□□ 0.5
CHL1O00533 AC092573.1-201ENST00000433054 884 ntBASIC18.18■□□□□ 0.5
CHL1O00533 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC18.18■□□□□ 0.5
CHL1O00533 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC18.18■□□□□ 0.5
CHL1O00533 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC18.18■□□□□ 0.5
CHL1O00533 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
CHL1O00533 MIR3180-2-201ENST00000581748 88 ntBASIC18.18■□□□□ 0.5
CHL1O00533 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC18.18■□□□□ 0.5
CHL1O00533 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CHL1O00533 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CHL1O00533 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
CHL1O00533 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC18.18■□□□□ 0.5
CHL1O00533 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHL1O00533 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC18.18■□□□□ 0.5
CHL1O00533 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHL1O00533 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHL1O00533 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms