Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC16■□□□□ 0.15
TRIM50Q86XT4 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRIM50Q86XT4 ORAOV1P1-201ENST00000503108 395 ntBASIC16■□□□□ 0.15
TRIM50Q86XT4 AC132872.1-201ENST00000566986 1195 ntBASIC16■□□□□ 0.15
TRIM50Q86XT4 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC16■□□□□ 0.15
TRIM50Q86XT4 WT1-AS_6.1-201ENST00000614919 121 ntBASIC16■□□□□ 0.15
TRIM50Q86XT4 AC025262.2-201ENST00000623975 1056 ntBASIC16■□□□□ 0.15
TRIM50Q86XT4 AC005618.3-201ENST00000624928 458 ntBASIC16■□□□□ 0.15
TRIM50Q86XT4 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM50Q86XT4 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM50Q86XT4 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM50Q86XT4 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC16■□□□□ 0.15
TRIM50Q86XT4 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM50Q86XT4 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRIM50Q86XT4 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16■□□□□ 0.15
TRIM50Q86XT4 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM50Q86XT4 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM50Q86XT4 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRIM50Q86XT4 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TRIM50Q86XT4 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 CCT8L1P-201ENST00000465400 1674 ntBASIC15.99■□□□□ 0.15
TRIM50Q86XT4 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 PFN2-202ENST00000423691 911 ntTSL 2 BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 RPL18AP3-201ENST00000462885 528 ntBASIC15.99■□□□□ 0.15
TRIM50Q86XT4 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 POLD4-208ENST00000532830 904 ntTSL 3 BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 AC104506.1-201ENST00000609247 429 ntBASIC15.99■□□□□ 0.15
TRIM50Q86XT4 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 AC009145.4-201ENST00000625119 1294 ntBASIC15.99■□□□□ 0.15
TRIM50Q86XT4 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 AC113367.3-201ENST00000508316 1912 ntBASIC15.99■□□□□ 0.15
TRIM50Q86XT4 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 API5-208ENST00000531273 1868 ntTSL 2 BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
TRIM50Q86XT4 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.98■□□□□ 0.15
TRIM50Q86XT4 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM50Q86XT4 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM50Q86XT4 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
TRIM50Q86XT4 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM50Q86XT4 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM50Q86XT4 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC15.98■□□□□ 0.15
TRIM50Q86XT4 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
TRIM50Q86XT4 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM50Q86XT4 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM50Q86XT4 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM50Q86XT4 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC15.98■□□□□ 0.15
TRIM50Q86XT4 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TRIM50Q86XT4 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
TRIM50Q86XT4 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TRIM50Q86XT4 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM50Q86XT4 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC15.98■□□□□ 0.15
TRIM50Q86XT4 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC15.98■□□□□ 0.15
TRIM50Q86XT4 RN7SL81P-201ENST00000493781 261 ntBASIC15.98■□□□□ 0.15
TRIM50Q86XT4 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM50Q86XT4 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC15.98■□□□□ 0.15
TRIM50Q86XT4 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC15.98■□□□□ 0.15
TRIM50Q86XT4 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC15.98■□□□□ 0.15
TRIM50Q86XT4 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms