Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 GATB-205ENST00000508611 605 ntTSL 2 BASIC12.92□□□□□ -0.34
VBP1P61758 AC008620.2-201ENST00000510294 1569 ntBASIC12.92□□□□□ -0.34
VBP1P61758 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
VBP1P61758 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VBP1P61758 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VBP1P61758 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.92□□□□□ -0.34
VBP1P61758 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC12.92□□□□□ -0.34
VBP1P61758 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC12.92□□□□□ -0.34
VBP1P61758 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.92□□□□□ -0.34
VBP1P61758 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC12.92□□□□□ -0.34
VBP1P61758 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VBP1P61758 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
VBP1P61758 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC12.92□□□□□ -0.34
VBP1P61758 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC12.92□□□□□ -0.34
VBP1P61758 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.92□□□□□ -0.34
VBP1P61758 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.92□□□□□ -0.34
VBP1P61758 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
VBP1P61758 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC12.92□□□□□ -0.34
VBP1P61758 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VBP1P61758 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VBP1P61758 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC12.92□□□□□ -0.34
VBP1P61758 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VBP1P61758 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.92□□□□□ -0.34
VBP1P61758 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VBP1P61758 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
VBP1P61758 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VBP1P61758 LINC01165-201ENST00000445190 1623 ntBASIC12.91□□□□□ -0.34
VBP1P61758 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
VBP1P61758 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VBP1P61758 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VBP1P61758 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VBP1P61758 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC12.91□□□□□ -0.34
VBP1P61758 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
VBP1P61758 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VBP1P61758 TUBB3P1-201ENST00000405796 1332 ntBASIC12.91□□□□□ -0.34
VBP1P61758 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VBP1P61758 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.91□□□□□ -0.34
VBP1P61758 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
VBP1P61758 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
VBP1P61758 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VBP1P61758 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VBP1P61758 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VBP1P61758 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VBP1P61758 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VBP1P61758 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VBP1P61758 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
VBP1P61758 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
VBP1P61758 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC12.91□□□□□ -0.34
VBP1P61758 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VBP1P61758 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VBP1P61758 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VBP1P61758 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VBP1P61758 USP17L6P-201ENST00000382470 1197 ntBASIC12.91□□□□□ -0.34
VBP1P61758 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.91□□□□□ -0.34
VBP1P61758 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.91□□□□□ -0.34
VBP1P61758 AK2P2-201ENST00000439142 405 ntBASIC12.91□□□□□ -0.34
VBP1P61758 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VBP1P61758 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC12.91□□□□□ -0.34
VBP1P61758 PPIE-208ENST00000470213 927 ntTSL 3 BASIC12.91□□□□□ -0.34
VBP1P61758 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC12.91□□□□□ -0.34
VBP1P61758 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC12.91□□□□□ -0.34
VBP1P61758 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VBP1P61758 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC12.91□□□□□ -0.34
VBP1P61758 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC12.91□□□□□ -0.34
VBP1P61758 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC12.91□□□□□ -0.34
VBP1P61758 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.91□□□□□ -0.34
VBP1P61758 AC138761.1-201ENST00000584393 385 ntBASIC12.91□□□□□ -0.34
VBP1P61758 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC12.91□□□□□ -0.34
VBP1P61758 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VBP1P61758 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.91□□□□□ -0.34
VBP1P61758 AC007967.4-201ENST00000614700 386 ntBASIC12.91□□□□□ -0.34
VBP1P61758 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.91□□□□□ -0.34
VBP1P61758 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VBP1P61758 OS9-203ENST00000389142 2457 ntTSL 5 BASIC12.91□□□□□ -0.34
VBP1P61758 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
VBP1P61758 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VBP1P61758 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VBP1P61758 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VBP1P61758 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC12.91□□□□□ -0.34
VBP1P61758 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VBP1P61758 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VBP1P61758 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
VBP1P61758 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VBP1P61758 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VBP1P61758 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VBP1P61758 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
VBP1P61758 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VBP1P61758 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VBP1P61758 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VBP1P61758 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.91□□□□□ -0.34
VBP1P61758 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC12.91□□□□□ -0.34
VBP1P61758 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VBP1P61758 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VBP1P61758 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VBP1P61758 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VBP1P61758 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
VBP1P61758 OR2I1P-208ENST00000641137 4948 ntBASIC12.91□□□□□ -0.34
VBP1P61758 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VBP1P61758 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VBP1P61758 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms