Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.98□□□□□ -0.01
CDH6P55285 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.98□□□□□ -0.01
CDH6P55285 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH6P55285 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDH6P55285 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH6P55285 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH6P55285 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH6P55285 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH6P55285 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.98□□□□□ -0.01
CDH6P55285 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH6P55285 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH6P55285 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH6P55285 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CDH6P55285 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH6P55285 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH6P55285 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH6P55285 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CDH6P55285 Z93015.1-201ENST00000451718 390 ntBASIC14.98□□□□□ -0.01
CDH6P55285 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDH6P55285 AC006122.1-201ENST00000493323 440 ntBASIC14.98□□□□□ -0.01
CDH6P55285 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.98□□□□□ -0.01
CDH6P55285 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.98□□□□□ -0.01
CDH6P55285 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDH6P55285 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.98□□□□□ -0.01
CDH6P55285 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CDH6P55285 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH6P55285 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.98□□□□□ -0.01
CDH6P55285 AL160314.3-201ENST00000556041 767 ntBASIC14.98□□□□□ -0.01
CDH6P55285 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH6P55285 AL359881.2-201ENST00000602973 570 ntBASIC14.98□□□□□ -0.01
CDH6P55285 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.98□□□□□ -0.01
CDH6P55285 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH6P55285 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH6P55285 PTENP1-202ENST00000532280 3996 ntBASIC14.98□□□□□ -0.01
CDH6P55285 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH6P55285 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CDH6P55285 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH6P55285 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH6P55285 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH6P55285 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH6P55285 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH6P55285 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CDH6P55285 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH6P55285 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH6P55285 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CDH6P55285 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CDH6P55285 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.98□□□□□ -0.01
CDH6P55285 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CDH6P55285 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDH6P55285 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CDH6P55285 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.98□□□□□ -0.01
CDH6P55285 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDH6P55285 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH6P55285 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CDH6P55285 CYP4F23P-201ENST00000593402 1579 ntBASIC14.98□□□□□ -0.01
CDH6P55285 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
CDH6P55285 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH6P55285 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH6P55285 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH6P55285 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.97□□□□□ -0.01
CDH6P55285 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH6P55285 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.97□□□□□ -0.01
CDH6P55285 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH6P55285 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH6P55285 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH6P55285 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.97□□□□□ -0.01
CDH6P55285 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH6P55285 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.97□□□□□ -0.01
CDH6P55285 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
CDH6P55285 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH6P55285 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH6P55285 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH6P55285 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH6P55285 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.97□□□□□ -0.01
CDH6P55285 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH6P55285 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH6P55285 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.97□□□□□ -0.01
CDH6P55285 RPSAP36-202ENST00000494591 1261 ntBASIC14.97□□□□□ -0.01
CDH6P55285 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.97□□□□□ -0.01
CDH6P55285 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH6P55285 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH6P55285 AC005730.2-201ENST00000564549 1184 ntBASIC14.97□□□□□ -0.01
CDH6P55285 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH6P55285 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH6P55285 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.97□□□□□ -0.01
CDH6P55285 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.97□□□□□ -0.01
CDH6P55285 AC133540.1-201ENST00000620845 1019 ntBASIC14.97□□□□□ -0.01
CDH6P55285 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH6P55285 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH6P55285 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH6P55285 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC14.97□□□□□ -0.01
CDH6P55285 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH6P55285 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH6P55285 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH6P55285 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH6P55285 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH6P55285 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH6P55285 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH6P55285 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.97□□□□□ -0.01
CDH6P55285 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms