Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
VCPP55072 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VCPP55072 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.45■□□□□ 0.06
VCPP55072 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
VCPP55072 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VCPP55072 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VCPP55072 RN7SKP230-201ENST00000365642 335 ntBASIC15.45■□□□□ 0.06
VCPP55072 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC15.45■□□□□ 0.06
VCPP55072 AL136309.1-201ENST00000403917 691 ntBASIC15.45■□□□□ 0.06
VCPP55072 HPGD-203ENST00000422112 805 ntTSL 2 BASIC15.45■□□□□ 0.06
VCPP55072 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.45■□□□□ 0.06
VCPP55072 AC012362.1-201ENST00000434906 739 ntBASIC15.45■□□□□ 0.06
VCPP55072 TUBB8P8-201ENST00000458717 1058 ntBASIC15.45■□□□□ 0.06
VCPP55072 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
VCPP55072 NSD1-211ENST00000511258 809 ntTSL 3 BASIC15.45■□□□□ 0.06
VCPP55072 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
VCPP55072 AL160314.3-201ENST00000556041 767 ntBASIC15.45■□□□□ 0.06
VCPP55072 DNM1P30-201ENST00000563586 452 ntBASIC15.45■□□□□ 0.06
VCPP55072 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
VCPP55072 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC15.45■□□□□ 0.06
VCPP55072 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
VCPP55072 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.45■□□□□ 0.06
VCPP55072 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
VCPP55072 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VCPP55072 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
VCPP55072 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
VCPP55072 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
VCPP55072 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VCPP55072 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.45■□□□□ 0.06
VCPP55072 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
VCPP55072 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
VCPP55072 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.45■□□□□ 0.06
VCPP55072 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VCPP55072 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VCPP55072 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
VCPP55072 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
VCPP55072 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VCPP55072 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VCPP55072 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
VCPP55072 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VCPP55072 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
VCPP55072 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VCPP55072 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VCPP55072 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
VCPP55072 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
VCPP55072 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VCPP55072 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
VCPP55072 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.44■□□□□ 0.06
VCPP55072 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.44■□□□□ 0.06
VCPP55072 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.44■□□□□ 0.06
VCPP55072 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.44■□□□□ 0.06
VCPP55072 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
VCPP55072 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
VCPP55072 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.44■□□□□ 0.06
VCPP55072 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
VCPP55072 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
VCPP55072 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
VCPP55072 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.44■□□□□ 0.06
VCPP55072 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
VCPP55072 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VCPP55072 RN7SKP214-201ENST00000364208 315 ntBASIC15.44■□□□□ 0.06
VCPP55072 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
VCPP55072 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
VCPP55072 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.44■□□□□ 0.06
VCPP55072 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC15.44■□□□□ 0.06
VCPP55072 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC15.44■□□□□ 0.06
VCPP55072 PUDPP3-201ENST00000445368 636 ntBASIC15.44■□□□□ 0.06
VCPP55072 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC15.44■□□□□ 0.06
VCPP55072 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC15.44■□□□□ 0.06
VCPP55072 ALG1L13P-202ENST00000519320 584 ntBASIC15.44■□□□□ 0.06
VCPP55072 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.44■□□□□ 0.06
VCPP55072 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
VCPP55072 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC15.44■□□□□ 0.06
VCPP55072 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC15.44■□□□□ 0.06
VCPP55072 AL022344.2-201ENST00000568976 968 ntBASIC15.44■□□□□ 0.06
VCPP55072 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC15.44■□□□□ 0.06
VCPP55072 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
VCPP55072 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC15.44■□□□□ 0.06
VCPP55072 AC138894.2-201ENST00000602838 371 ntBASIC15.44■□□□□ 0.06
VCPP55072 AL358472.3-201ENST00000608147 415 ntBASIC15.44■□□□□ 0.06
VCPP55072 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
VCPP55072 BEND3P1-201ENST00000421591 1944 ntBASIC15.44■□□□□ 0.06
VCPP55072 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VCPP55072 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VCPP55072 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
VCPP55072 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
VCPP55072 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VCPP55072 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
VCPP55072 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.44■□□□□ 0.06
VCPP55072 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
VCPP55072 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.44■□□□□ 0.06
VCPP55072 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VCPP55072 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
VCPP55072 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.44■□□□□ 0.06
VCPP55072 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
VCPP55072 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
VCPP55072 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VCPP55072 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.44■□□□□ 0.06
VCPP55072 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VCPP55072 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms