Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PSEN1P49768 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.62■□□□□ 0.09
PSEN1P49768 AL390755.1-201ENST00000623716 2027 ntBASIC15.62■□□□□ 0.09
PSEN1P49768 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PSEN1P49768 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PSEN1P49768 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PSEN1P49768 MIR326-201ENST00000362220 95 ntBASIC15.62■□□□□ 0.09
PSEN1P49768 C9orf85-203ENST00000377031 1107 ntTSL 3 BASIC15.62■□□□□ 0.09
PSEN1P49768 AL390835.1-201ENST00000413941 901 ntTSL 5 BASIC15.62■□□□□ 0.09
PSEN1P49768 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.62■□□□□ 0.09
PSEN1P49768 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.62■□□□□ 0.09
PSEN1P49768 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC15.62■□□□□ 0.09
PSEN1P49768 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PSEN1P49768 RPSAP36-202ENST00000494591 1261 ntBASIC15.62■□□□□ 0.09
PSEN1P49768 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC15.62■□□□□ 0.09
PSEN1P49768 NSMCE2-208ENST00000520866 1183 ntTSL 2 BASIC15.62■□□□□ 0.09
PSEN1P49768 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.62■□□□□ 0.09
PSEN1P49768 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.62■□□□□ 0.09
PSEN1P49768 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.62■□□□□ 0.09
PSEN1P49768 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.62■□□□□ 0.09
PSEN1P49768 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.62■□□□□ 0.09
PSEN1P49768 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.62■□□□□ 0.09
PSEN1P49768 AL049840.6-202ENST00000603373 279 ntBASIC15.62■□□□□ 0.09
PSEN1P49768 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.62■□□□□ 0.09
PSEN1P49768 AC091271.1-201ENST00000611877 1162 ntBASIC15.62■□□□□ 0.09
PSEN1P49768 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PSEN1P49768 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PSEN1P49768 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
PSEN1P49768 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PSEN1P49768 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.62■□□□□ 0.09
PSEN1P49768 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PSEN1P49768 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PSEN1P49768 RIMKLB-213ENST00000619374 1519 ntTSL 5 BASIC15.62■□□□□ 0.09
PSEN1P49768 AC007228.2-201ENST00000602145 1328 ntBASIC15.62■□□□□ 0.09
PSEN1P49768 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
PSEN1P49768 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PSEN1P49768 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PSEN1P49768 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PSEN1P49768 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PSEN1P49768 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PSEN1P49768 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PSEN1P49768 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PSEN1P49768 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.62■□□□□ 0.09
PSEN1P49768 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PSEN1P49768 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PSEN1P49768 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PSEN1P49768 IRAK4-202ENST00000440781 1409 ntTSL 2 BASIC15.61■□□□□ 0.09
PSEN1P49768 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PSEN1P49768 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PSEN1P49768 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PSEN1P49768 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PSEN1P49768 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PSEN1P49768 KCNMB3-201ENST00000314235 1485 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PSEN1P49768 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PSEN1P49768 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC15.61■□□□□ 0.09
PSEN1P49768 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PSEN1P49768 ATL2-204ENST00000406122 2864 ntTSL 5 BASIC15.61■□□□□ 0.09
PSEN1P49768 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PSEN1P49768 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.61■□□□□ 0.09
PSEN1P49768 CA14-201ENST00000369111 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PSEN1P49768 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PSEN1P49768 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PSEN1P49768 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PSEN1P49768 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
PSEN1P49768 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
PSEN1P49768 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.61■□□□□ 0.09
PSEN1P49768 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.61■□□□□ 0.09
PSEN1P49768 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC15.61■□□□□ 0.09
PSEN1P49768 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
PSEN1P49768 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.61■□□□□ 0.09
PSEN1P49768 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PSEN1P49768 HIST2H2BB-201ENST00000449108 381 ntBASIC15.61■□□□□ 0.09
PSEN1P49768 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.61■□□□□ 0.09
PSEN1P49768 AC068587.2-201ENST00000478386 781 ntBASIC15.61■□□□□ 0.09
PSEN1P49768 FAM8A2P-201ENST00000528813 1142 ntBASIC15.61■□□□□ 0.09
PSEN1P49768 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC15.61■□□□□ 0.09
PSEN1P49768 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
PSEN1P49768 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.61■□□□□ 0.09
PSEN1P49768 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
PSEN1P49768 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC15.61■□□□□ 0.09
PSEN1P49768 BX088702.1-201ENST00000610784 235 ntBASIC15.61■□□□□ 0.09
PSEN1P49768 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PSEN1P49768 AC253576.2-201ENST00000618815 580 ntBASIC15.61■□□□□ 0.09
PSEN1P49768 MIR6869-201ENST00000619434 62 ntBASIC15.61■□□□□ 0.09
PSEN1P49768 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PSEN1P49768 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.61■□□□□ 0.09
PSEN1P49768 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.61■□□□□ 0.09
PSEN1P49768 CU459211.1-201ENST00000635667 749 ntBASIC15.61■□□□□ 0.09
PSEN1P49768 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
PSEN1P49768 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
PSEN1P49768 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
PSEN1P49768 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PSEN1P49768 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PSEN1P49768 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.61■□□□□ 0.09
PSEN1P49768 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.61■□□□□ 0.09
PSEN1P49768 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PSEN1P49768 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PSEN1P49768 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PSEN1P49768 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
PSEN1P49768 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms