RNA–Protein interactions for RNA: ENST00000520866.5

NSMCE2-208, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 2 BASIC

Gene NSMCE2, Length 1,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-208ENST00000520866 AEBP2Q6ZN18 517 aaPredicted RBP32.46■■■□□ 2.79
NSMCE2-208ENST00000520866 CHIC1Q5VXU3 224 aa31.33■■■□□ 2.61
NSMCE2-208ENST00000520866 SENP3Q9H4L4 574 aaPredicted RBP27.7■■■□□ 2.02
NSMCE2-208ENST00000520866 PHF23Q9BUL5 403 aaPredicted RBP27.46■■□□□ 1.99
NSMCE2-208ENST00000520866 FOXD1Q16676 465 aa25.69■■□□□ 1.7
NSMCE2-208ENST00000520866 PLPPR3Q6T4P5 718 aa25.27■■□□□ 1.64
NSMCE2-208ENST00000520866 PPP6R1Q9UPN7 881 aa24.35■■□□□ 1.49
NSMCE2-208ENST00000520866 ADRA2BP18089 450 aa24.28■■□□□ 1.48
NSMCE2-208ENST00000520866 PIAS4Q8N2W9 510 aaPredicted RBP24.11■■□□□ 1.45
NSMCE2-208ENST00000520866 MSH5O43196 834 aa23.95■■□□□ 1.42
NSMCE2-208ENST00000520866 POTEDQ86YR6 584 aa22.51■■□□□ 1.19
NSMCE2-208ENST00000520866 SCAF1Q9H7N4 1312 aaKnown RBP22.35■■□□□ 1.17
NSMCE2-208ENST00000520866 PPP4R3CPQ6ZMV5 832 aa22.16■■□□□ 1.14
NSMCE2-208ENST00000520866 MAPK8IP2Q13387 824 aaPredicted RBP22.14■■□□□ 1.13
NSMCE2-208ENST00000520866 DMRT2Q9Y5R5 561 aa22.03■■□□□ 1.12
NSMCE2-208ENST00000520866 CNKSR2Q8WXI2 1034 aa21.69■■□□□ 1.06
NSMCE2-208ENST00000520866 NCBP3Q53F19 620 aaKnown RBP21.51■■□□□ 1.03
NSMCE2-208ENST00000520866 HOXD11P31277 338 aaPredicted RBP21.43■■□□□ 1.02
NSMCE2-208ENST00000520866 RNF216Q9NWF9 866 aaPredicted RBP21.39■■□□□ 1.01
NSMCE2-208ENST00000520866 NPM3O75607 178 aaKnown RBP21.13■□□□□ 0.97
NSMCE2-208ENST00000520866 KCNA4P22459 653 aa21.11■□□□□ 0.97
NSMCE2-208ENST00000520866 DCAF8L1A6NGE4 600 aa20.97■□□□□ 0.95
NSMCE2-208ENST00000520866 DNAJC5BQ9UF47 199 aa20.77■□□□□ 0.92
NSMCE2-208ENST00000520866 RNF39Q9H2S5 420 aa20.46■□□□□ 0.87
NSMCE2-208ENST00000520866 NISCHQ9Y2I1 1504 aa20.41■□□□□ 0.86
NSMCE2-208ENST00000520866 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.34■□□□□ 0.85
NSMCE2-208ENST00000520866 C1QBPQ07021 282 aaKnown RBP20.22■□□□□ 0.83
NSMCE2-208ENST00000520866 CACNB1Q02641 598 aaPredicted RBP20.19■□□□□ 0.82
NSMCE2-208ENST00000520866 SLC4A2P04920 1241 aa20.06■□□□□ 0.8
NSMCE2-208ENST00000520866 SLC4A1APQ9BWU0 796 aaKnown RBP20.04■□□□□ 0.8
NSMCE2-208ENST00000520866 U3KPZ7 1027 aaPredicted RBP19.97■□□□□ 0.79
NSMCE2-208ENST00000520866 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.67■□□□□ 0.74
NSMCE2-208ENST00000520866 HNRNPUL2Q1KMD3 747 aaKnown RBP19.67■□□□□ 0.74
NSMCE2-208ENST00000520866 FOXD4L1Q9NU39 408 aa19.61■□□□□ 0.73
NSMCE2-208ENST00000520866 MYCNP04198 464 aaPredicted RBP19.58■□□□□ 0.72
NSMCE2-208ENST00000520866 APLP2Q06481 763 aa19.58■□□□□ 0.72
NSMCE2-208ENST00000520866 SAMD1Q6SPF0 538 aaPredicted RBP19.55■□□□□ 0.72
NSMCE2-208ENST00000520866 SPINK5Q9NQ38 1064 aaPredicted RBP19.5■□□□□ 0.71
NSMCE2-208ENST00000520866 CAPN15O75808 1086 aa19.46■□□□□ 0.71
NSMCE2-208ENST00000520866 ZBTB22O15209 634 aa19.4■□□□□ 0.7
NSMCE2-208ENST00000520866 ZNF219Q9P2Y4 722 aaPredicted RBP19.33■□□□□ 0.68
NSMCE2-208ENST00000520866 DSG3P32926 999 aa19.29■□□□□ 0.68
NSMCE2-208ENST00000520866 TRHP20396 242 aaPredicted RBP19.24■□□□□ 0.67
NSMCE2-208ENST00000520866 ATXN8OSP0DMR3 200 aa19.05■□□□□ 0.64
NSMCE2-208ENST00000520866 ABCB7O75027 752 aa19■□□□□ 0.63
NSMCE2-208ENST00000520866 ATF5Q9Y2D1 282 aaPredicted RBP19■□□□□ 0.63
NSMCE2-208ENST00000520866 CSRNP3Q8WYN3 585 aa18.95■□□□□ 0.62
NSMCE2-208ENST00000520866 EHMT2Q96KQ7 1210 aa18.87■□□□□ 0.61
NSMCE2-208ENST00000520866 POLA2Q14181 598 aa18.86■□□□□ 0.61
NSMCE2-208ENST00000520866 ZBTB12Q9Y330 459 aaPredicted RBP18.63■□□□□ 0.57
NSMCE2-208ENST00000520866 ABCC9O60706 1549 aa18.57■□□□□ 0.56
NSMCE2-208ENST00000520866 CCDC180Q9P1Z9 1646 aa18.45■□□□□ 0.54
NSMCE2-208ENST00000520866 RBM42Q9BTD8 480 aaKnown RBP18.45■□□□□ 0.54
NSMCE2-208ENST00000520866 FBLN2P98095 1184 aa18.32■□□□□ 0.52
NSMCE2-208ENST00000520866 OSCARQ8IYS5 282 aa18.22■□□□□ 0.51
NSMCE2-208ENST00000520866 MKRN4PQ13434 485 aaPredicted RBP18.18■□□□□ 0.5
NSMCE2-208ENST00000520866 AKT1S1Q96B36 256 aa18.12■□□□□ 0.49
NSMCE2-208ENST00000520866 SPDYE2BA6NHP3 402 aa18.06■□□□□ 0.48
NSMCE2-208ENST00000520866 SPDYE6P0CI01 402 aa18.06■□□□□ 0.48
NSMCE2-208ENST00000520866 SPDYE2Q495Y8 402 aa18.06■□□□□ 0.48
NSMCE2-208ENST00000520866 REM2Q8IYK8 340 aaPredicted RBP17.89■□□□□ 0.45
NSMCE2-208ENST00000520866 SSUH2Q9Y2M2 353 aa17.87■□□□□ 0.45
NSMCE2-208ENST00000520866 ZNF692Q9BU19 519 aaPredicted RBP17.86■□□□□ 0.45
NSMCE2-208ENST00000520866 CHRDL2Q6WN34 429 aa17.8■□□□□ 0.44
NSMCE2-208ENST00000520866 POTEHQ6S545 545 aa17.74■□□□□ 0.43
NSMCE2-208ENST00000520866 RB1CC1Q8TDY2 1594 aa17.7■□□□□ 0.42
NSMCE2-208ENST00000520866 PITPNM1O00562 1244 aa17.67■□□□□ 0.42
NSMCE2-208ENST00000520866 SPDYE1Q8NFV5 336 aaPredicted RBP17.62■□□□□ 0.41
NSMCE2-208ENST00000520866 PABPN1Q86U42 306 aaKnown RBP eCLIP17.6■□□□□ 0.41
NSMCE2-208ENST00000520866 SPDYE4A6NLX3 237 aa17.58■□□□□ 0.4
NSMCE2-208ENST00000520866 NACADO15069 1562 aa17.54■□□□□ 0.4
NSMCE2-208ENST00000520866 FXR2P51116 673 aaKnown RBP eCLIP17.48■□□□□ 0.39
NSMCE2-208ENST00000520866 PIP4P2Q8N4L2 257 aa17.47■□□□□ 0.39
NSMCE2-208ENST00000520866 CLEC11AQ9Y240 323 aa17.46■□□□□ 0.39
NSMCE2-208ENST00000520866 PROM2Q8N271 834 aa17.31■□□□□ 0.36
NSMCE2-208ENST00000520866 STAG3Q9UJ98 1225 aa17.31■□□□□ 0.36
NSMCE2-208ENST00000520866 PRR29P0C7W0 189 aa17.3■□□□□ 0.36
NSMCE2-208ENST00000520866 MYO15BQ96JP2 1530 aa17.29■□□□□ 0.36
NSMCE2-208ENST00000520866 DCAF8L2P0C7V8 631 aa17.28■□□□□ 0.36
NSMCE2-208ENST00000520866 PRKAR2AP13861 404 aaKnown RBP17.22■□□□□ 0.35
NSMCE2-208ENST00000520866 FKBP8Q14318 412 aa17.13■□□□□ 0.33
NSMCE2-208ENST00000520866 UNC13AQ9UPW8 1703 aa17.09■□□□□ 0.33
NSMCE2-208ENST00000520866 SHROOM4Q9ULL8 1493 aa17.07■□□□□ 0.32
NSMCE2-208ENST00000520866 CHADLQ6NUI6 762 aa17.06■□□□□ 0.32
NSMCE2-208ENST00000520866 BICRAQ9NZM4 1560 aa17.06■□□□□ 0.32
NSMCE2-208ENST00000520866 HAX1O00165 279 aa17■□□□□ 0.31
NSMCE2-208ENST00000520866 CREBZFQ9NS37 354 aa16.98■□□□□ 0.31
NSMCE2-208ENST00000520866 FARP1Q9Y4F1 1045 aaPredicted RBP16.95■□□□□ 0.3
NSMCE2-208ENST00000520866 DCAF1Q9Y4B6 1507 aa16.95■□□□□ 0.3
NSMCE2-208ENST00000520866 C19orf67A6NJJ6 358 aa16.9■□□□□ 0.3
NSMCE2-208ENST00000520866 ZCCHC6Q5VYS8 1495 aaKnown RBP16.87■□□□□ 0.29
NSMCE2-208ENST00000520866 SP7Q8TDD2 431 aaPredicted RBP16.86■□□□□ 0.29
NSMCE2-208ENST00000520866 CECR2Q9BXF3 1484 aa16.82■□□□□ 0.28
NSMCE2-208ENST00000520866 EVX2Q03828 476 aa16.79■□□□□ 0.28
NSMCE2-208ENST00000520866 CC2D2AQ9P2K1 1620 aa16.78■□□□□ 0.28
NSMCE2-208ENST00000520866 MNX1P50219 401 aaPredicted RBP16.76■□□□□ 0.27
NSMCE2-208ENST00000520866 FBXO3Q9UK99 471 aa16.75■□□□□ 0.27
NSMCE2-208ENST00000520866 NPM1P06748 294 aaKnown RBP eCLIP16.73■□□□□ 0.27
NSMCE2-208ENST00000520866 EIF4G1Q04637 1599 aaKnown RBP16.72■□□□□ 0.27
NSMCE2-208ENST00000520866 PLEKHG5O94827 1062 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms