RNA–Protein interactions for RNA: ENST00000314235.9

KCNMB3-201, Transcript of potassium calcium-activated channel subfamily M regulatory beta subunit 3, humanhuman

TSL 1 (best) BASIC

Gene KCNMB3, Length 1,485 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMB3-201ENST00000314235 AEBP2Q6ZN18 517 aaPredicted RBP34.36■■■■□ 3.09
KCNMB3-201ENST00000314235 CHIC1Q5VXU3 224 aa32.41■■■□□ 2.78
KCNMB3-201ENST00000314235 SENP3Q9H4L4 574 aaPredicted RBP29.32■■■□□ 2.28
KCNMB3-201ENST00000314235 PHF23Q9BUL5 403 aaPredicted RBP28.9■■■□□ 2.22
KCNMB3-201ENST00000314235 FOXD1Q16676 465 aa27.36■■□□□ 1.97
KCNMB3-201ENST00000314235 PLPPR3Q6T4P5 718 aa25.76■■□□□ 1.71
KCNMB3-201ENST00000314235 MSH5O43196 834 aa25.69■■□□□ 1.7
KCNMB3-201ENST00000314235 PIAS4Q8N2W9 510 aaPredicted RBP25.47■■□□□ 1.67
KCNMB3-201ENST00000314235 POTEDQ86YR6 584 aa25.46■■□□□ 1.67
KCNMB3-201ENST00000314235 PPP6R1Q9UPN7 881 aa25.41■■□□□ 1.66
KCNMB3-201ENST00000314235 ADRA2BP18089 450 aa25.28■■□□□ 1.64
KCNMB3-201ENST00000314235 NISCHQ9Y2I1 1504 aa23.5■■□□□ 1.35
KCNMB3-201ENST00000314235 MAPK8IP2Q13387 824 aaPredicted RBP23.29■■□□□ 1.32
KCNMB3-201ENST00000314235 DMRT2Q9Y5R5 561 aa23.24■■□□□ 1.31
KCNMB3-201ENST00000314235 SCAF1Q9H7N4 1312 aaKnown RBP23.12■■□□□ 1.29
KCNMB3-201ENST00000314235 PPP4R3CPQ6ZMV5 832 aa22.54■■□□□ 1.2
KCNMB3-201ENST00000314235 HOXD11P31277 338 aaPredicted RBP22.32■■□□□ 1.16
KCNMB3-201ENST00000314235 CNKSR2Q8WXI2 1034 aa22.19■■□□□ 1.14
KCNMB3-201ENST00000314235 DCAF8L1A6NGE4 600 aa22.15■■□□□ 1.14
KCNMB3-201ENST00000314235 CACNB1Q02641 598 aaPredicted RBP22.12■■□□□ 1.13
KCNMB3-201ENST00000314235 RNF216Q9NWF9 866 aaPredicted RBP22.07■■□□□ 1.12
KCNMB3-201ENST00000314235 RNF39Q9H2S5 420 aa21.92■■□□□ 1.1
KCNMB3-201ENST00000314235 DNAJC5BQ9UF47 199 aa21.64■■□□□ 1.06
KCNMB3-201ENST00000314235 NCBP3Q53F19 620 aaKnown RBP21.58■■□□□ 1.05
KCNMB3-201ENST00000314235 C1QBPQ07021 282 aaKnown RBP21.58■■□□□ 1.04
KCNMB3-201ENST00000314235 NPM3O75607 178 aaKnown RBP21.32■■□□□ 1
KCNMB3-201ENST00000314235 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.15■□□□□ 0.98
KCNMB3-201ENST00000314235 U3KPZ7 1027 aaPredicted RBP20.76■□□□□ 0.91
KCNMB3-201ENST00000314235 KCNA4P22459 653 aa20.69■□□□□ 0.9
KCNMB3-201ENST00000314235 CCDC180Q9P1Z9 1646 aa20.58■□□□□ 0.88
KCNMB3-201ENST00000314235 SPINK5Q9NQ38 1064 aaPredicted RBP20.5■□□□□ 0.87
KCNMB3-201ENST00000314235 SLC4A2P04920 1241 aa20.44■□□□□ 0.86
KCNMB3-201ENST00000314235 DSG3P32926 999 aa20.44■□□□□ 0.86
KCNMB3-201ENST00000314235 CAPN15O75808 1086 aa20.42■□□□□ 0.86
KCNMB3-201ENST00000314235 APLP2Q06481 763 aa20.11■□□□□ 0.81
KCNMB3-201ENST00000314235 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.05■□□□□ 0.8
KCNMB3-201ENST00000314235 HNRNPUL2Q1KMD3 747 aaKnown RBP20.05■□□□□ 0.8
KCNMB3-201ENST00000314235 ZNF219Q9P2Y4 722 aaPredicted RBP20.05■□□□□ 0.8
KCNMB3-201ENST00000314235 TRHP20396 242 aaPredicted RBP20.03■□□□□ 0.8
KCNMB3-201ENST00000314235 SAMD1Q6SPF0 538 aaPredicted RBP19.94■□□□□ 0.78
KCNMB3-201ENST00000314235 ABCB7O75027 752 aa19.93■□□□□ 0.78
KCNMB3-201ENST00000314235 POTEHQ6S545 545 aa19.89■□□□□ 0.77
KCNMB3-201ENST00000314235 MYCNP04198 464 aaPredicted RBP19.71■□□□□ 0.75
KCNMB3-201ENST00000314235 ABCC9O60706 1549 aa19.69■□□□□ 0.74
KCNMB3-201ENST00000314235 ZCCHC6Q5VYS8 1495 aaKnown RBP19.66■□□□□ 0.74
KCNMB3-201ENST00000314235 DCAF8L2P0C7V8 631 aa19.58■□□□□ 0.72
KCNMB3-201ENST00000314235 RBM42Q9BTD8 480 aaKnown RBP19.48■□□□□ 0.71
KCNMB3-201ENST00000314235 POLA2Q14181 598 aa19.48■□□□□ 0.71
KCNMB3-201ENST00000314235 SLC4A1APQ9BWU0 796 aaKnown RBP19.46■□□□□ 0.71
KCNMB3-201ENST00000314235 DCAF1Q9Y4B6 1507 aa19.45■□□□□ 0.7
KCNMB3-201ENST00000314235 FOXD4L1Q9NU39 408 aa19.38■□□□□ 0.69
KCNMB3-201ENST00000314235 MYO15BQ96JP2 1530 aa19.33■□□□□ 0.68
KCNMB3-201ENST00000314235 ATF5Q9Y2D1 282 aaPredicted RBP19.28■□□□□ 0.68
KCNMB3-201ENST00000314235 NACADO15069 1562 aa19.27■□□□□ 0.68
KCNMB3-201ENST00000314235 RB1CC1Q8TDY2 1594 aa19.15■□□□□ 0.66
KCNMB3-201ENST00000314235 CHRDL2Q6WN34 429 aa19.15■□□□□ 0.66
KCNMB3-201ENST00000314235 ZBTB12Q9Y330 459 aaPredicted RBP19.09■□□□□ 0.65
KCNMB3-201ENST00000314235 ZBTB22O15209 634 aa19.04■□□□□ 0.64
KCNMB3-201ENST00000314235 AKT1S1Q96B36 256 aa19.01■□□□□ 0.63
KCNMB3-201ENST00000314235 SHROOM4Q9ULL8 1493 aa18.99■□□□□ 0.63
KCNMB3-201ENST00000314235 OSCARQ8IYS5 282 aa18.88■□□□□ 0.61
KCNMB3-201ENST00000314235 SCRIBQ14160 1630 aa18.87■□□□□ 0.61
KCNMB3-201ENST00000314235 ATXN8OSP0DMR3 200 aa18.85■□□□□ 0.61
KCNMB3-201ENST00000314235 REM2Q8IYK8 340 aaPredicted RBP18.82■□□□□ 0.6
KCNMB3-201ENST00000314235 UNC13AQ9UPW8 1703 aa18.67■□□□□ 0.58
KCNMB3-201ENST00000314235 PIP4P2Q8N4L2 257 aa18.65■□□□□ 0.58
KCNMB3-201ENST00000314235 PITPNM1O00562 1244 aa18.62■□□□□ 0.57
KCNMB3-201ENST00000314235 PABPN1Q86U42 306 aaKnown RBP eCLIP18.58■□□□□ 0.56
KCNMB3-201ENST00000314235 FXR2P51116 673 aaKnown RBP eCLIP18.54■□□□□ 0.56
KCNMB3-201ENST00000314235 SP7Q8TDD2 431 aaPredicted RBP18.54■□□□□ 0.56
KCNMB3-201ENST00000314235 BICRAQ9NZM4 1560 aa18.53■□□□□ 0.56
KCNMB3-201ENST00000314235 SPDYE2BA6NHP3 402 aa18.5■□□□□ 0.55
KCNMB3-201ENST00000314235 SPDYE6P0CI01 402 aa18.5■□□□□ 0.55
KCNMB3-201ENST00000314235 FBLN2P98095 1184 aa18.5■□□□□ 0.55
KCNMB3-201ENST00000314235 SPDYE2Q495Y8 402 aa18.5■□□□□ 0.55
KCNMB3-201ENST00000314235 MKRN4PQ13434 485 aaPredicted RBP18.4■□□□□ 0.54
KCNMB3-201ENST00000314235 HAX1O00165 279 aa18.31■□□□□ 0.52
KCNMB3-201ENST00000314235 SSUH2Q9Y2M2 353 aa18.26■□□□□ 0.51
KCNMB3-201ENST00000314235 CECR2Q9BXF3 1484 aa18.26■□□□□ 0.51
KCNMB3-201ENST00000314235 SUPT5HO00267 1087 aaKnown RBP18.2■□□□□ 0.5
KCNMB3-201ENST00000314235 SPDYE1Q8NFV5 336 aaPredicted RBP18.2■□□□□ 0.5
KCNMB3-201ENST00000314235 ZNF692Q9BU19 519 aaPredicted RBP18.19■□□□□ 0.5
KCNMB3-201ENST00000314235 BAZ1AQ9NRL2 1556 aaPredicted RBP18.17■□□□□ 0.5
KCNMB3-201ENST00000314235 RSF1Q96T23 1441 aaPredicted RBP18.15■□□□□ 0.5
KCNMB3-201ENST00000314235 EVX2Q03828 476 aa18.14■□□□□ 0.49
KCNMB3-201ENST00000314235 MROH2BQ7Z745 1585 aa18.12■□□□□ 0.49
KCNMB3-201ENST00000314235 CLEC11AQ9Y240 323 aa18.12■□□□□ 0.49
KCNMB3-201ENST00000314235 PRKAR2AP13861 404 aaKnown RBP18.1■□□□□ 0.49
KCNMB3-201ENST00000314235 SMARCA4P51532 1647 aa18.09■□□□□ 0.49
KCNMB3-201ENST00000314235 EIF4G1Q04637 1599 aaKnown RBP18.01■□□□□ 0.47
KCNMB3-201ENST00000314235 C19orf67A6NJJ6 358 aa17.95■□□□□ 0.46
KCNMB3-201ENST00000314235 CSRNP3Q8WYN3 585 aa17.95■□□□□ 0.46
KCNMB3-201ENST00000314235 WIZO95785 1651 aa17.94■□□□□ 0.46
KCNMB3-201ENST00000314235 PEG3Q9GZU2 1588 aa17.89■□□□□ 0.45
KCNMB3-201ENST00000314235 ATAD2BQ9ULI0 1458 aa17.89■□□□□ 0.45
KCNMB3-201ENST00000314235 SMARCA2P51531 1590 aa17.88■□□□□ 0.45
KCNMB3-201ENST00000314235 CHADLQ6NUI6 762 aa17.83■□□□□ 0.45
KCNMB3-201ENST00000314235 PRR29P0C7W0 189 aa17.82■□□□□ 0.44
KCNMB3-201ENST00000314235 NCAPD3P42695 1498 aa17.81■□□□□ 0.44
KCNMB3-201ENST00000314235 CC2D2AQ9P2K1 1620 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms