Protein–RNA interactions for Protein: P48382

RFX5, DNA-binding protein RFX5, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX5P48382 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFX5P48382 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFX5P48382 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFX5P48382 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RFX5P48382 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
RFX5P48382 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFX5P48382 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RFX5P48382 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RFX5P48382 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.38■□□□□ 0.37
RFX5P48382 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFX5P48382 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFX5P48382 AC117489.1-201ENST00000625169 3217 ntBASIC17.38■□□□□ 0.37
RFX5P48382 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC17.38■□□□□ 0.37
RFX5P48382 AC004554.1-201ENST00000422830 1468 ntBASIC17.38■□□□□ 0.37
RFX5P48382 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.38■□□□□ 0.37
RFX5P48382 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC17.38■□□□□ 0.37
RFX5P48382 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC17.38■□□□□ 0.37
RFX5P48382 GOLGA8IP-202ENST00000611635 2100 ntBASIC17.38■□□□□ 0.37
RFX5P48382 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC17.38■□□□□ 0.37
RFX5P48382 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC17.38■□□□□ 0.37
RFX5P48382 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
RFX5P48382 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RFX5P48382 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFX5P48382 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC17.38■□□□□ 0.37
RFX5P48382 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC17.38■□□□□ 0.37
RFX5P48382 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC17.38■□□□□ 0.37
RFX5P48382 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC17.38■□□□□ 0.37
RFX5P48382 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC17.38■□□□□ 0.37
RFX5P48382 RPL3P2-204ENST00000413027 1203 ntBASIC17.38■□□□□ 0.37
RFX5P48382 AC092573.1-201ENST00000433054 884 ntBASIC17.38■□□□□ 0.37
RFX5P48382 MPRIPP1-201ENST00000452433 1089 ntBASIC17.38■□□□□ 0.37
RFX5P48382 AC008267.1-201ENST00000474858 1069 ntBASIC17.38■□□□□ 0.37
RFX5P48382 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC17.38■□□□□ 0.37
RFX5P48382 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC17.38■□□□□ 0.37
RFX5P48382 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC17.38■□□□□ 0.37
RFX5P48382 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC17.38■□□□□ 0.37
RFX5P48382 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFX5P48382 ODCP-201ENST00000459650 1639 ntBASIC17.38■□□□□ 0.37
RFX5P48382 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFX5P48382 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RFX5P48382 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFX5P48382 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RFX5P48382 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFX5P48382 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
RFX5P48382 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFX5P48382 MSANTD2P1-201ENST00000445341 1368 ntBASIC17.38■□□□□ 0.37
RFX5P48382 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC17.38■□□□□ 0.37
RFX5P48382 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFX5P48382 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RFX5P48382 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFX5P48382 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RFX5P48382 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFX5P48382 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC17.37■□□□□ 0.37
RFX5P48382 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFX5P48382 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC17.37■□□□□ 0.37
RFX5P48382 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RFX5P48382 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFX5P48382 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFX5P48382 RNVU1-8-201ENST00000364272 125 ntBASIC17.37■□□□□ 0.37
RFX5P48382 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
RFX5P48382 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
RFX5P48382 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC17.37■□□□□ 0.37
RFX5P48382 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC17.37■□□□□ 0.37
RFX5P48382 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC17.37■□□□□ 0.37
RFX5P48382 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC17.37■□□□□ 0.37
RFX5P48382 STK24P1-201ENST00000455035 1291 ntBASIC17.37■□□□□ 0.37
RFX5P48382 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
RFX5P48382 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
RFX5P48382 AC104784.1-201ENST00000473096 294 ntBASIC17.37■□□□□ 0.37
RFX5P48382 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC17.37■□□□□ 0.37
RFX5P48382 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC17.37■□□□□ 0.37
RFX5P48382 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
RFX5P48382 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC17.37■□□□□ 0.37
RFX5P48382 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFX5P48382 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RFX5P48382 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFX5P48382 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFX5P48382 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFX5P48382 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFX5P48382 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RFX5P48382 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC17.37■□□□□ 0.37
RFX5P48382 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RFX5P48382 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
RFX5P48382 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC17.37■□□□□ 0.37
RFX5P48382 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.37■□□□□ 0.37
RFX5P48382 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX5P48382 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RFX5P48382 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RFX5P48382 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX5P48382 ABR-228ENST00000574437 3196 ntTSL 5 BASIC17.36■□□□□ 0.37
RFX5P48382 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
RFX5P48382 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX5P48382 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX5P48382 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX5P48382 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX5P48382 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
RFX5P48382 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX5P48382 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
RFX5P48382 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RFX5P48382 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms