Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL1P22362 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC12.35□□□□□ -0.43
CCL1P22362 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.35□□□□□ -0.43
CCL1P22362 KRT17P7-201ENST00000451704 1104 ntBASIC12.35□□□□□ -0.43
CCL1P22362 KLF2P4-201ENST00000451959 1225 ntBASIC12.35□□□□□ -0.43
CCL1P22362 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC12.35□□□□□ -0.43
CCL1P22362 CR383656.12-201ENST00000549567 513 ntBASIC12.35□□□□□ -0.43
CCL1P22362 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CCL1P22362 NAA38-206ENST00000576384 424 ntTSL 2 BASIC12.35□□□□□ -0.43
CCL1P22362 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC12.35□□□□□ -0.43
CCL1P22362 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC12.35□□□□□ -0.43
CCL1P22362 CECR7-204ENST00000609932 568 ntTSL 2 BASIC12.35□□□□□ -0.43
CCL1P22362 AP000346.4-201ENST00000614827 381 ntBASIC12.35□□□□□ -0.43
CCL1P22362 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CCL1P22362 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL1P22362 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL1P22362 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CCL1P22362 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CCL1P22362 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL1P22362 ST20-AS1-201ENST00000560255 4223 ntBASIC12.35□□□□□ -0.43
CCL1P22362 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CCL1P22362 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.35□□□□□ -0.43
CCL1P22362 AGAP12P-201ENST00000585227 2359 ntBASIC12.35□□□□□ -0.43
CCL1P22362 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CCL1P22362 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.35□□□□□ -0.43
CCL1P22362 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.35□□□□□ -0.43
CCL1P22362 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL1P22362 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
CCL1P22362 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL1P22362 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL1P22362 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC12.35□□□□□ -0.43
CCL1P22362 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.35□□□□□ -0.43
CCL1P22362 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.35□□□□□ -0.43
CCL1P22362 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CCL1P22362 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL1P22362 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.35□□□□□ -0.43
CCL1P22362 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.35□□□□□ -0.43
CCL1P22362 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC12.34□□□□□ -0.43
CCL1P22362 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL1P22362 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL1P22362 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CCL1P22362 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC12.34□□□□□ -0.43
CCL1P22362 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL1P22362 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCL1P22362 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL1P22362 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL1P22362 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL1P22362 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL1P22362 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL1P22362 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCL1P22362 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCL1P22362 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL1P22362 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
CCL1P22362 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC12.34□□□□□ -0.43
CCL1P22362 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
CCL1P22362 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC12.34□□□□□ -0.43
CCL1P22362 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCL1P22362 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL1P22362 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL1P22362 AC136604.1-202ENST00000425471 771 ntBASIC12.34□□□□□ -0.43
CCL1P22362 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC12.34□□□□□ -0.43
CCL1P22362 AC092580.1-201ENST00000433998 658 ntBASIC12.34□□□□□ -0.43
CCL1P22362 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL1P22362 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC12.34□□□□□ -0.43
CCL1P22362 RNF41-210ENST00000552244 716 ntTSL 3 BASIC12.34□□□□□ -0.43
CCL1P22362 JPT2-214ENST00000569765 782 ntTSL 2 BASIC12.34□□□□□ -0.43
CCL1P22362 EEF1DP1-201ENST00000585891 896 ntBASIC12.34□□□□□ -0.43
CCL1P22362 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC12.34□□□□□ -0.43
CCL1P22362 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC12.34□□□□□ -0.43
CCL1P22362 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL1P22362 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL1P22362 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL1P22362 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL1P22362 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CCL1P22362 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL1P22362 STK26-204ENST00000481105 1835 ntTSL 2 BASIC12.34□□□□□ -0.43
CCL1P22362 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL1P22362 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.34□□□□□ -0.43
CCL1P22362 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.34□□□□□ -0.43
CCL1P22362 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL1P22362 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
CCL1P22362 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CCL1P22362 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
CCL1P22362 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCL1P22362 AC025183.3-201ENST00000623526 1482 ntBASIC12.34□□□□□ -0.43
CCL1P22362 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
CCL1P22362 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.43
CCL1P22362 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
CCL1P22362 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL1P22362 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCL1P22362 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL1P22362 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.33□□□□□ -0.44
CCL1P22362 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL1P22362 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL1P22362 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCL1P22362 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL1P22362 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.33□□□□□ -0.44
CCL1P22362 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL1P22362 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL1P22362 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms