Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 VENTXP1-201ENST00000569334 2716 ntBASIC12.89□□□□□ -0.35
SSR3Q9UNL2 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSR3Q9UNL2 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SSR3Q9UNL2 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSR3Q9UNL2 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSR3Q9UNL2 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSR3Q9UNL2 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SSR3Q9UNL2 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSR3Q9UNL2 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSR3Q9UNL2 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
SSR3Q9UNL2 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC12.89□□□□□ -0.35
SSR3Q9UNL2 RPL30-202ENST00000396070 440 ntTSL 2 BASIC12.89□□□□□ -0.35
SSR3Q9UNL2 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.89□□□□□ -0.35
SSR3Q9UNL2 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.89□□□□□ -0.35
SSR3Q9UNL2 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.89□□□□□ -0.35
SSR3Q9UNL2 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.89□□□□□ -0.35
SSR3Q9UNL2 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC12.89□□□□□ -0.35
SSR3Q9UNL2 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC12.89□□□□□ -0.35
SSR3Q9UNL2 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.89□□□□□ -0.35
SSR3Q9UNL2 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.89□□□□□ -0.35
SSR3Q9UNL2 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSR3Q9UNL2 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.89□□□□□ -0.35
SSR3Q9UNL2 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC12.89□□□□□ -0.35
SSR3Q9UNL2 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.89□□□□□ -0.35
SSR3Q9UNL2 AC004840.1-201ENST00000636359 365 ntBASIC12.89□□□□□ -0.35
SSR3Q9UNL2 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
SSR3Q9UNL2 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSR3Q9UNL2 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSR3Q9UNL2 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC12.89□□□□□ -0.35
SSR3Q9UNL2 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSR3Q9UNL2 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSR3Q9UNL2 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
SSR3Q9UNL2 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC12.89□□□□□ -0.35
SSR3Q9UNL2 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.89□□□□□ -0.35
SSR3Q9UNL2 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SSR3Q9UNL2 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
SSR3Q9UNL2 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.89□□□□□ -0.35
SSR3Q9UNL2 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SSR3Q9UNL2 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSR3Q9UNL2 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
SSR3Q9UNL2 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSR3Q9UNL2 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC12.89□□□□□ -0.35
SSR3Q9UNL2 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSR3Q9UNL2 AL022323.5-201ENST00000624101 2059 ntBASIC12.89□□□□□ -0.35
SSR3Q9UNL2 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSR3Q9UNL2 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 AL138725.1-201ENST00000407347 1314 ntBASIC12.88□□□□□ -0.35
SSR3Q9UNL2 IL9RP2-201ENST00000423948 1312 ntBASIC12.88□□□□□ -0.35
SSR3Q9UNL2 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 CD82-202ENST00000342935 967 ntTSL 5 BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 HLA-V-204ENST00000476601 1289 ntBASIC12.88□□□□□ -0.35
SSR3Q9UNL2 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 AC093813.1-201ENST00000605066 256 ntBASIC12.88□□□□□ -0.35
SSR3Q9UNL2 AP001002.3-201ENST00000623482 206 ntBASIC12.88□□□□□ -0.35
SSR3Q9UNL2 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSR3Q9UNL2 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms