Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 RN7SL559P-201ENST00000476501 297 ntBASIC21.6■■□□□ 1.05
RIMBP3Q9UFD9 BCRP5-201ENST00000514371 253 ntBASIC21.6■■□□□ 1.05
RIMBP3Q9UFD9 AC079601.2-201ENST00000547729 775 ntBASIC21.6■■□□□ 1.05
RIMBP3Q9UFD9 AC018868.2-201ENST00000559655 1259 ntBASIC21.6■■□□□ 1.05
RIMBP3Q9UFD9 AC245748.2-201ENST00000588655 574 ntTSL 4 BASIC21.6■■□□□ 1.05
RIMBP3Q9UFD9 FAM231B-201ENST00000600179 510 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
RIMBP3Q9UFD9 AC022392.1-201ENST00000609403 744 ntBASIC21.6■■□□□ 1.05
RIMBP3Q9UFD9 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC21.6■■□□□ 1.05
RIMBP3Q9UFD9 LINC01988-202ENST00000636975 921 ntTSL 5 BASIC21.6■■□□□ 1.05
RIMBP3Q9UFD9 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
RIMBP3Q9UFD9 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RIMBP3Q9UFD9 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RIMBP3Q9UFD9 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RIMBP3Q9UFD9 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC21.6■■□□□ 1.05
RIMBP3Q9UFD9 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RIMBP3Q9UFD9 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC21.6■■□□□ 1.05
RIMBP3Q9UFD9 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RIMBP3Q9UFD9 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RIMBP3Q9UFD9 CHIAP2-204ENST00000532686 1449 ntBASIC21.59■■□□□ 1.05
RIMBP3Q9UFD9 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RIMBP3Q9UFD9 RARRES3-202ENST00000354445 696 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
RIMBP3Q9UFD9 KRT41P-201ENST00000393988 1293 ntBASIC21.59■■□□□ 1.05
RIMBP3Q9UFD9 AL390726.1-201ENST00000451357 202 ntBASIC21.59■■□□□ 1.05
RIMBP3Q9UFD9 AL132656.1-201ENST00000452173 490 ntBASIC21.59■■□□□ 1.05
RIMBP3Q9UFD9 ADPGK-202ENST00000456471 808 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RIMBP3Q9UFD9 RBP5-202ENST00000542370 564 ntTSL 2 BASIC21.59■■□□□ 1.05
RIMBP3Q9UFD9 AP005121.2-201ENST00000583306 1101 ntBASIC21.59■■□□□ 1.05
RIMBP3Q9UFD9 AC069366.2-201ENST00000583643 430 ntBASIC21.59■■□□□ 1.05
RIMBP3Q9UFD9 AC010615.2-201ENST00000596705 566 ntTSL 4 BASIC21.59■■□□□ 1.05
RIMBP3Q9UFD9 AP006621.5-202ENST00000623692 636 ntBASIC21.59■■□□□ 1.05
RIMBP3Q9UFD9 TNFSF13-209ENST00000625791 955 ntTSL 2 BASIC21.59■■□□□ 1.05
RIMBP3Q9UFD9 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RIMBP3Q9UFD9 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RIMBP3Q9UFD9 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC21.59■■□□□ 1.05
RIMBP3Q9UFD9 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RIMBP3Q9UFD9 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
RIMBP3Q9UFD9 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RIMBP3Q9UFD9 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RIMBP3Q9UFD9 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC21.59■■□□□ 1.05
RIMBP3Q9UFD9 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
RIMBP3Q9UFD9 CCDC103-203ENST00000410027 571 ntTSL 4 BASIC21.58■■□□□ 1.05
RIMBP3Q9UFD9 AL358876.2-201ENST00000424689 477 ntTSL 3 BASIC21.58■■□□□ 1.05
RIMBP3Q9UFD9 MTND6P7-201ENST00000433237 524 ntBASIC21.58■■□□□ 1.05
RIMBP3Q9UFD9 AC025822.1-201ENST00000455525 633 ntTSL 2 BASIC21.58■■□□□ 1.05
RIMBP3Q9UFD9 OR7E126P-201ENST00000526217 888 ntBASIC21.58■■□□□ 1.05
RIMBP3Q9UFD9 CCDC42-202ENST00000539522 1087 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RIMBP3Q9UFD9 ELP5-210ENST00000573657 687 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RIMBP3Q9UFD9 AC007378.1-201ENST00000609765 478 ntBASIC21.58■■□□□ 1.05
RIMBP3Q9UFD9 Metazoa_SRP.85-201ENST00000610909 260 ntBASIC21.58■■□□□ 1.05
RIMBP3Q9UFD9 PRKN-210ENST00000612540 603 ntTSL 5 BASIC21.58■■□□□ 1.05
RIMBP3Q9UFD9 PTPRT-212ENST00000620410 940 ntTSL 5 BASIC21.58■■□□□ 1.05
RIMBP3Q9UFD9 LINC00694-204ENST00000637612 1059 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
RIMBP3Q9UFD9 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC21.58■■□□□ 1.05
RIMBP3Q9UFD9 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC21.58■■□□□ 1.05
RIMBP3Q9UFD9 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RIMBP3Q9UFD9 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RIMBP3Q9UFD9 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.58■■□□□ 1.05
RIMBP3Q9UFD9 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC21.58■■□□□ 1.05
RIMBP3Q9UFD9 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RIMBP3Q9UFD9 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RIMBP3Q9UFD9 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC21.58■■□□□ 1.05
RIMBP3Q9UFD9 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
RIMBP3Q9UFD9 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
RIMBP3Q9UFD9 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RIMBP3Q9UFD9 CASC15-202ENST00000561912 1449 ntTSL 5 BASIC21.58■■□□□ 1.05
RIMBP3Q9UFD9 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RIMBP3Q9UFD9 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
RIMBP3Q9UFD9 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RIMBP3Q9UFD9 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
RIMBP3Q9UFD9 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC21.58■■□□□ 1.04
RIMBP3Q9UFD9 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.04
RIMBP3Q9UFD9 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
RIMBP3Q9UFD9 TXN2-204ENST00000416967 1280 ntTSL 2 BASIC21.58■■□□□ 1.04
RIMBP3Q9UFD9 TRBV22-1-201ENST00000424543 337 ntBASIC21.58■■□□□ 1.04
RIMBP3Q9UFD9 SNHG11-211ENST00000444816 621 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RIMBP3Q9UFD9 TGFA-206ENST00000445399 812 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RIMBP3Q9UFD9 COL18A1-AS2-201ENST00000446475 552 ntTSL 4 BASIC21.58■■□□□ 1.04
RIMBP3Q9UFD9 AL357140.1-201ENST00000454104 424 ntTSL 2 BASIC21.58■■□□□ 1.04
RIMBP3Q9UFD9 SNHG11-214ENST00000457218 880 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RIMBP3Q9UFD9 AC090095.1-201ENST00000519275 871 ntBASIC21.58■■□□□ 1.04
RIMBP3Q9UFD9 LINC01606-208ENST00000521653 557 ntTSL 4 BASIC21.58■■□□□ 1.04
RIMBP3Q9UFD9 AC087190.3-201ENST00000562893 753 ntTSL 3 BASIC21.58■■□□□ 1.04
RIMBP3Q9UFD9 TLE2-205ENST00000586422 389 ntTSL 5 BASIC21.58■■□□□ 1.04
RIMBP3Q9UFD9 SARS2-211ENST00000598831 665 ntTSL 5 BASIC21.58■■□□□ 1.04
RIMBP3Q9UFD9 UBR1-212ENST00000627960 189 ntTSL 5 BASIC21.58■■□□□ 1.04
RIMBP3Q9UFD9 C18orf15-201ENST00000623680 2534 ntBASIC21.58■■□□□ 1.04
RIMBP3Q9UFD9 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RIMBP3Q9UFD9 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RIMBP3Q9UFD9 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RIMBP3Q9UFD9 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC21.58■■□□□ 1.04
RIMBP3Q9UFD9 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RIMBP3Q9UFD9 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC21.57■■□□□ 1.04
RIMBP3Q9UFD9 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RIMBP3Q9UFD9 SDR16C5-203ENST00000522671 1988 ntTSL 2 BASIC21.57■■□□□ 1.04
RIMBP3Q9UFD9 KIR3DL3-201ENST00000291860 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RIMBP3Q9UFD9 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RIMBP3Q9UFD9 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
RIMBP3Q9UFD9 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC21.57■■□□□ 1.04
RIMBP3Q9UFD9 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RIMBP3Q9UFD9 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms