Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 AC092933.1-201ENST00000393644 945 ntBASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 HIST1H2BPS3-201ENST00000419683 341 ntBASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 AC016694.1-201ENST00000434179 700 ntBASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 FO681548.1-201ENST00000455617 1132 ntBASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 GPR53P-205ENST00000457298 1084 ntBASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 AC103988.2-201ENST00000561804 725 ntBASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 ORC6-206ENST00000568364 888 ntTSL 5 BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 RN7SL48P-201ENST00000579283 293 ntBASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 AL359183.1-201ENST00000623796 2132 ntBASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 AC105206.1-202ENST00000314927 2368 ntBASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC12.05□□□□□ -0.48
LIN7CQ9NUP9 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 PPT1-213ENST00000641319 2388 ntBASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 MXI1-205ENST00000393134 889 ntTSL 2 BASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 KRT17P8-201ENST00000540749 863 ntBASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 RAB43P1-201ENST00000561790 589 ntBASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 AC025279.2-201ENST00000569730 653 ntBASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 AP001002.3-201ENST00000623482 206 ntBASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 AC132938.4-201ENST00000623835 848 ntBASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
LIN7CQ9NUP9 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms