Protein–RNA interactions for Protein: Q9BV40

VAMP8, Vesicle-associated membrane protein 8, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP8Q9BV40 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
VAMP8Q9BV40 BIVM-201ENST00000257336 3859 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VAMP8Q9BV40 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
VAMP8Q9BV40 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC10.44□□□□□ -0.74
VAMP8Q9BV40 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VAMP8Q9BV40 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VAMP8Q9BV40 AK2P2-201ENST00000439142 405 ntBASIC10.44□□□□□ -0.74
VAMP8Q9BV40 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC10.44□□□□□ -0.74
VAMP8Q9BV40 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC10.44□□□□□ -0.74
VAMP8Q9BV40 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC10.44□□□□□ -0.74
VAMP8Q9BV40 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC10.44□□□□□ -0.74
VAMP8Q9BV40 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC10.44□□□□□ -0.74
VAMP8Q9BV40 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC10.44□□□□□ -0.74
VAMP8Q9BV40 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC10.44□□□□□ -0.74
VAMP8Q9BV40 AC140113.3-201ENST00000605663 199 ntBASIC10.44□□□□□ -0.74
VAMP8Q9BV40 AC026471.5-201ENST00000615068 467 ntBASIC10.44□□□□□ -0.74
VAMP8Q9BV40 LDLRAD3-201ENST00000315571 3798 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VAMP8Q9BV40 HERC2P9-203ENST00000528584 2947 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
VAMP8Q9BV40 UBE2L3-204ENST00000545681 2932 ntTSL 2 BASIC10.44□□□□□ -0.74
VAMP8Q9BV40 FAM160A1-201ENST00000435205 4576 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
VAMP8Q9BV40 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VAMP8Q9BV40 PARP15-205ENST00000483793 4439 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
VAMP8Q9BV40 SOX13-203ENST00000367204 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VAMP8Q9BV40 ARHGEF11-201ENST00000361409 5788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
VAMP8Q9BV40 DDB2-201ENST00000256996 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VAMP8Q9BV40 TRIM68-201ENST00000300747 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VAMP8Q9BV40 SARS-202ENST00000369923 1882 ntTSL 5 BASIC10.44□□□□□ -0.74
VAMP8Q9BV40 THBS1-201ENST00000260356 7775 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VAMP8Q9BV40 PLD5-204ENST00000442594 3305 ntAPPRIS P3 TSL 5 BASIC10.44□□□□□ -0.74
VAMP8Q9BV40 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
VAMP8Q9BV40 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
VAMP8Q9BV40 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC10.44□□□□□ -0.74
VAMP8Q9BV40 ACOT11-201ENST00000343744 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
VAMP8Q9BV40 STX16-205ENST00000361830 4318 ntTSL 5 BASIC10.44□□□□□ -0.74
VAMP8Q9BV40 SMIM5-202ENST00000537494 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VAMP8Q9BV40 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC10.44□□□□□ -0.74
VAMP8Q9BV40 CTCFL-217ENST00000608425 2915 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
VAMP8Q9BV40 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC10.44□□□□□ -0.74
VAMP8Q9BV40 STRA6-201ENST00000323940 2864 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
VAMP8Q9BV40 RALA-201ENST00000005257 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
VAMP8Q9BV40 TXNRD1-214ENST00000526691 3974 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 AIF1L-206ENST00000372302 3340 ntTSL 2 BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 SLC8B1-213ENST00000552014 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 XAB2-201ENST00000358368 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 EIF4E3-205ENST00000448225 6209 ntTSL 5 BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 SCO1-201ENST00000255390 9612 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 HERC6-203ENST00000380265 3781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 VPS39-201ENST00000318006 4844 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 MCM3-202ENST00000419835 2523 ntTSL 2 BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 PKD1L2-210ENST00000533478 5669 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 TRIM25-202ENST00000537230 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 FAM131A-211ENST00000639617 4450 ntTSL 5 BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 GIT2-204ENST00000361006 5444 ntTSL 5 BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 STARP1-201ENST00000397973 869 ntBASIC10.43□□□□□ -0.74
VAMP8Q9BV40 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 EEF1DP4-201ENST00000446006 880 ntBASIC10.43□□□□□ -0.74
VAMP8Q9BV40 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 PFN2-205ENST00000461868 613 ntTSL 2 BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 JPT2-214ENST00000569765 782 ntTSL 2 BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 AGPAT3-203ENST00000398058 4338 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 ABLIM3-203ENST00000356541 2290 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 ABLIM3-211ENST00000517451 2287 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 DNAJB12-203ENST00000444643 3278 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 ORAI2-201ENST00000356387 10811 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 SHPRH-201ENST00000275233 6649 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 AC091170.1-201ENST00000582983 2190 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 DNAJC9-201ENST00000372950 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
VAMP8Q9BV40 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms