Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
APH1AQ96BI3 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APH1AQ96BI3 STK26-204ENST00000481105 1835 ntTSL 2 BASIC12.78□□□□□ -0.36
APH1AQ96BI3 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
APH1AQ96BI3 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APH1AQ96BI3 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
APH1AQ96BI3 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.78□□□□□ -0.36
APH1AQ96BI3 AL133338.1-201ENST00000565695 1517 ntBASIC12.78□□□□□ -0.36
APH1AQ96BI3 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APH1AQ96BI3 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.78□□□□□ -0.36
APH1AQ96BI3 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC12.78□□□□□ -0.36
APH1AQ96BI3 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.78□□□□□ -0.36
APH1AQ96BI3 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
APH1AQ96BI3 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APH1AQ96BI3 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APH1AQ96BI3 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.78□□□□□ -0.36
APH1AQ96BI3 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.78□□□□□ -0.36
APH1AQ96BI3 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
APH1AQ96BI3 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APH1AQ96BI3 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.78□□□□□ -0.36
APH1AQ96BI3 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APH1AQ96BI3 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.78□□□□□ -0.36
APH1AQ96BI3 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APH1AQ96BI3 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
APH1AQ96BI3 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
APH1AQ96BI3 SDCCAG3P2-201ENST00000326105 1023 ntBASIC12.78□□□□□ -0.36
APH1AQ96BI3 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APH1AQ96BI3 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APH1AQ96BI3 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APH1AQ96BI3 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APH1AQ96BI3 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
APH1AQ96BI3 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
APH1AQ96BI3 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC12.78□□□□□ -0.36
APH1AQ96BI3 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APH1AQ96BI3 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
APH1AQ96BI3 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
APH1AQ96BI3 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APH1AQ96BI3 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APH1AQ96BI3 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.78□□□□□ -0.36
APH1AQ96BI3 TSPY25P-201ENST00000429463 745 ntBASIC12.78□□□□□ -0.36
APH1AQ96BI3 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APH1AQ96BI3 Z97180.1-201ENST00000445173 988 ntBASIC12.78□□□□□ -0.36
APH1AQ96BI3 RN7SL11P-201ENST00000471305 293 ntBASIC12.78□□□□□ -0.36
APH1AQ96BI3 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC12.78□□□□□ -0.36
APH1AQ96BI3 ACTG1P17-201ENST00000558391 1119 ntBASIC12.78□□□□□ -0.36
APH1AQ96BI3 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC12.78□□□□□ -0.36
APH1AQ96BI3 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC12.78□□□□□ -0.36
APH1AQ96BI3 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC12.78□□□□□ -0.36
APH1AQ96BI3 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APH1AQ96BI3 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APH1AQ96BI3 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APH1AQ96BI3 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APH1AQ96BI3 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.78□□□□□ -0.36
APH1AQ96BI3 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APH1AQ96BI3 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
APH1AQ96BI3 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.78□□□□□ -0.36
APH1AQ96BI3 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APH1AQ96BI3 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.78□□□□□ -0.36
APH1AQ96BI3 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APH1AQ96BI3 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APH1AQ96BI3 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.78□□□□□ -0.36
APH1AQ96BI3 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
APH1AQ96BI3 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
APH1AQ96BI3 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
APH1AQ96BI3 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.77□□□□□ -0.36
APH1AQ96BI3 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.77□□□□□ -0.36
APH1AQ96BI3 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
APH1AQ96BI3 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
APH1AQ96BI3 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
APH1AQ96BI3 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
APH1AQ96BI3 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
APH1AQ96BI3 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
APH1AQ96BI3 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
APH1AQ96BI3 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.77□□□□□ -0.37
APH1AQ96BI3 NCR3-202ENST00000376071 541 ntTSL 5 BASIC12.77□□□□□ -0.37
APH1AQ96BI3 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
APH1AQ96BI3 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC12.77□□□□□ -0.37
APH1AQ96BI3 SPTLC1P5-201ENST00000450718 252 ntBASIC12.77□□□□□ -0.37
APH1AQ96BI3 REEP1-202ENST00000453231 940 ntTSL 2 BASIC12.77□□□□□ -0.37
APH1AQ96BI3 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
APH1AQ96BI3 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
APH1AQ96BI3 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
APH1AQ96BI3 ADM-202ENST00000524948 584 ntTSL 2 BASIC12.77□□□□□ -0.37
APH1AQ96BI3 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
APH1AQ96BI3 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC12.77□□□□□ -0.37
APH1AQ96BI3 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.77□□□□□ -0.37
APH1AQ96BI3 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
APH1AQ96BI3 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APH1AQ96BI3 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
APH1AQ96BI3 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
APH1AQ96BI3 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
APH1AQ96BI3 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
APH1AQ96BI3 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
APH1AQ96BI3 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APH1AQ96BI3 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.37
APH1AQ96BI3 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APH1AQ96BI3 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.37
APH1AQ96BI3 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
APH1AQ96BI3 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.77□□□□□ -0.37
APH1AQ96BI3 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms