Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DDX1Q92499 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC15.29■□□□□ 0.04
DDX1Q92499 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DDX1Q92499 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DDX1Q92499 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DDX1Q92499 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DDX1Q92499 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
DDX1Q92499 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
DDX1Q92499 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DDX1Q92499 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DDX1Q92499 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DDX1Q92499 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC15.29■□□□□ 0.04
DDX1Q92499 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
DDX1Q92499 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
DDX1Q92499 AP002353.1-201ENST00000528257 1599 ntBASIC15.28■□□□□ 0.04
DDX1Q92499 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
DDX1Q92499 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
DDX1Q92499 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DDX1Q92499 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
DDX1Q92499 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DDX1Q92499 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DDX1Q92499 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
DDX1Q92499 AHCYP4-201ENST00000419201 1315 ntBASIC15.28■□□□□ 0.04
DDX1Q92499 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
DDX1Q92499 GOLGA8EP-201ENST00000530246 1959 ntBASIC15.28■□□□□ 0.04
DDX1Q92499 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC15.28■□□□□ 0.04
DDX1Q92499 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC15.28■□□□□ 0.04
DDX1Q92499 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DDX1Q92499 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
DDX1Q92499 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.28■□□□□ 0.04
DDX1Q92499 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
DDX1Q92499 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.28■□□□□ 0.04
DDX1Q92499 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.28■□□□□ 0.04
DDX1Q92499 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC15.28■□□□□ 0.04
DDX1Q92499 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.28■□□□□ 0.04
DDX1Q92499 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC15.28■□□□□ 0.04
DDX1Q92499 AL512310.5-201ENST00000551999 515 ntBASIC15.28■□□□□ 0.04
DDX1Q92499 AC008805.1-201ENST00000590892 364 ntBASIC15.28■□□□□ 0.04
DDX1Q92499 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC15.28■□□□□ 0.04
DDX1Q92499 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC15.28■□□□□ 0.04
DDX1Q92499 AL023803.2-201ENST00000620080 638 ntBASIC15.28■□□□□ 0.04
DDX1Q92499 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
DDX1Q92499 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.28■□□□□ 0.04
DDX1Q92499 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DDX1Q92499 AC105206.1-202ENST00000314927 2368 ntBASIC15.28■□□□□ 0.04
DDX1Q92499 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
DDX1Q92499 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC15.28■□□□□ 0.04
DDX1Q92499 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DDX1Q92499 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DDX1Q92499 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
DDX1Q92499 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
DDX1Q92499 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
DDX1Q92499 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
DDX1Q92499 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DDX1Q92499 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DDX1Q92499 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
DDX1Q92499 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DDX1Q92499 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
DDX1Q92499 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
DDX1Q92499 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
DDX1Q92499 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
DDX1Q92499 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DDX1Q92499 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
DDX1Q92499 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
DDX1Q92499 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
DDX1Q92499 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DDX1Q92499 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
DDX1Q92499 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
DDX1Q92499 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
DDX1Q92499 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
DDX1Q92499 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
DDX1Q92499 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DDX1Q92499 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DDX1Q92499 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DDX1Q92499 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
DDX1Q92499 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DDX1Q92499 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
DDX1Q92499 DEF8-202ENST00000418391 852 ntTSL 2 BASIC15.27■□□□□ 0.04
DDX1Q92499 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.27■□□□□ 0.04
DDX1Q92499 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC15.27■□□□□ 0.04
DDX1Q92499 AC021723.1-201ENST00000486306 515 ntBASIC15.27■□□□□ 0.04
DDX1Q92499 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DDX1Q92499 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC15.27■□□□□ 0.04
DDX1Q92499 MIR3907-201ENST00000579424 151 ntBASIC15.27■□□□□ 0.04
DDX1Q92499 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC15.27■□□□□ 0.04
DDX1Q92499 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
DDX1Q92499 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC15.27■□□□□ 0.04
DDX1Q92499 AL591471.1-201ENST00000621855 229 ntBASIC15.27■□□□□ 0.04
DDX1Q92499 AC092299.1-201ENST00000632679 757 ntBASIC15.27■□□□□ 0.04
DDX1Q92499 AC068587.8-201ENST00000641239 219 ntBASIC15.27■□□□□ 0.04
DDX1Q92499 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
DDX1Q92499 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
DDX1Q92499 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
DDX1Q92499 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
DDX1Q92499 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.27■□□□□ 0.03
DDX1Q92499 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
DDX1Q92499 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
DDX1Q92499 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
DDX1Q92499 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
DDX1Q92499 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms