Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHKBP1Q8TBC3 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 JTB-202ENST00000356648 1040 ntTSL 2 BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 AL627422.1-201ENST00000434104 580 ntBASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 FTH1P22-201ENST00000456305 520 ntBASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 RN7SL277P-201ENST00000481521 288 ntBASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 AC130709.1-201ENST00000484779 1212 ntBASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.1■□□□□ 0.01
SHKBP1Q8TBC3 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHKBP1Q8TBC3 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHKBP1Q8TBC3 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC15.09■□□□□ 0.01
SHKBP1Q8TBC3 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SHKBP1Q8TBC3 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHKBP1Q8TBC3 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHKBP1Q8TBC3 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
SHKBP1Q8TBC3 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHKBP1Q8TBC3 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHKBP1Q8TBC3 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SHKBP1Q8TBC3 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHKBP1Q8TBC3 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHKBP1Q8TBC3 KRT17P5-201ENST00000332088 839 ntBASIC15.09■□□□□ 0.01
SHKBP1Q8TBC3 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHKBP1Q8TBC3 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SHKBP1Q8TBC3 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SHKBP1Q8TBC3 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC15.09■□□□□ 0.01
SHKBP1Q8TBC3 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SHKBP1Q8TBC3 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC15.09■□□□□ 0.01
SHKBP1Q8TBC3 CHCHD2P9-201ENST00000461726 456 ntBASIC15.09■□□□□ 0.01
SHKBP1Q8TBC3 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SHKBP1Q8TBC3 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC15.09■□□□□ 0.01
SHKBP1Q8TBC3 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC15.09■□□□□ 0.01
SHKBP1Q8TBC3 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC15.09■□□□□ 0.01
SHKBP1Q8TBC3 RPL17P45-201ENST00000586289 509 ntBASIC15.09■□□□□ 0.01
SHKBP1Q8TBC3 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHKBP1Q8TBC3 WT1-AS_6.1-201ENST00000614919 121 ntBASIC15.09■□□□□ 0.01
SHKBP1Q8TBC3 CMC2-224ENST00000630396 481 ntTSL 5 BASIC15.09■□□□□ 0.01
SHKBP1Q8TBC3 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHKBP1Q8TBC3 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHKBP1Q8TBC3 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC15.09■□□□□ 0.01
SHKBP1Q8TBC3 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHKBP1Q8TBC3 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHKBP1Q8TBC3 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SHKBP1Q8TBC3 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHKBP1Q8TBC3 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
SHKBP1Q8TBC3 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHKBP1Q8TBC3 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SHKBP1Q8TBC3 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SHKBP1Q8TBC3 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
SHKBP1Q8TBC3 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms