Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 BX324167.2-201ENST00000623717 3316 ntBASIC10.79□□□□□ -0.68
NUP35Q8NFH5 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 AC104758.3-203ENST00000562938 2123 ntBASIC10.79□□□□□ -0.68
NUP35Q8NFH5 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 AC008620.2-201ENST00000510294 1569 ntBASIC10.79□□□□□ -0.68
NUP35Q8NFH5 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 MRPL3P1-201ENST00000400109 1033 ntBASIC10.79□□□□□ -0.68
NUP35Q8NFH5 AL139094.1-201ENST00000405549 1188 ntBASIC10.79□□□□□ -0.68
NUP35Q8NFH5 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 KRT18P32-201ENST00000424695 1287 ntBASIC10.79□□□□□ -0.68
NUP35Q8NFH5 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 KRT18P3-201ENST00000451602 1288 ntBASIC10.79□□□□□ -0.68
NUP35Q8NFH5 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 GCOM2-201ENST00000509133 1104 ntBASIC10.79□□□□□ -0.68
NUP35Q8NFH5 AC022616.1-201ENST00000518688 554 ntBASIC10.79□□□□□ -0.68
NUP35Q8NFH5 VPS18-202ENST00000558474 873 ntTSL 3 BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 AP001002.3-201ENST00000623482 206 ntBASIC10.79□□□□□ -0.68
NUP35Q8NFH5 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 AL109936.8-201ENST00000641772 604 ntBASIC10.79□□□□□ -0.68
NUP35Q8NFH5 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 AC012531.1-201ENST00000562848 2680 ntBASIC10.79□□□□□ -0.68
NUP35Q8NFH5 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 AC073862.5-201ENST00000624129 2027 ntBASIC10.79□□□□□ -0.68
NUP35Q8NFH5 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 PCDHB17P-202ENST00000623466 3066 ntBASIC10.78□□□□□ -0.68
NUP35Q8NFH5 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 BRF1-202ENST00000379932 884 ntTSL 5 BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 FAM58DP-201ENST00000428076 619 ntBASIC10.78□□□□□ -0.68
NUP35Q8NFH5 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 TPM4P1-201ENST00000436100 807 ntBASIC10.78□□□□□ -0.68
NUP35Q8NFH5 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
NUP35Q8NFH5 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC10.78□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms