Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC27Q2M243 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC27Q2M243 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC18.58■□□□□ 0.57
CCDC27Q2M243 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC27Q2M243 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC27Q2M243 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CCDC27Q2M243 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC18.58■□□□□ 0.56
CCDC27Q2M243 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC27Q2M243 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC27Q2M243 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC27Q2M243 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CCDC27Q2M243 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC18.58■□□□□ 0.56
CCDC27Q2M243 TSACC-208ENST00000481479 741 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC27Q2M243 AC005740.1-201ENST00000515639 522 ntBASIC18.58■□□□□ 0.56
CCDC27Q2M243 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC18.58■□□□□ 0.56
CCDC27Q2M243 AC079336.7-201ENST00000623428 1078 ntBASIC18.58■□□□□ 0.56
CCDC27Q2M243 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC27Q2M243 AC068760.1-201ENST00000493579 1953 ntBASIC18.58■□□□□ 0.56
CCDC27Q2M243 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC27Q2M243 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
CCDC27Q2M243 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC27Q2M243 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CCDC27Q2M243 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CCDC27Q2M243 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC27Q2M243 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CCDC27Q2M243 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC27Q2M243 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC27Q2M243 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CCDC27Q2M243 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CCDC27Q2M243 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC27Q2M243 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC27Q2M243 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC27Q2M243 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC27Q2M243 AC061965.1-201ENST00000560524 1465 ntBASIC18.58■□□□□ 0.56
CCDC27Q2M243 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC27Q2M243 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC27Q2M243 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC27Q2M243 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC27Q2M243 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CCDC27Q2M243 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC27Q2M243 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC27Q2M243 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC27Q2M243 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC27Q2M243 KRT17P5-201ENST00000332088 839 ntBASIC18.57■□□□□ 0.56
CCDC27Q2M243 NAGK-204ENST00000443872 878 ntTSL 3 BASIC18.57■□□□□ 0.56
CCDC27Q2M243 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CCDC27Q2M243 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CCDC27Q2M243 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
CCDC27Q2M243 NDUFB10P1-201ENST00000567319 521 ntBASIC18.57■□□□□ 0.56
CCDC27Q2M243 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
CCDC27Q2M243 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC27Q2M243 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC27Q2M243 AF254983.2-201ENST00000612331 135 ntBASIC18.57■□□□□ 0.56
CCDC27Q2M243 CR392039.2-201ENST00000623182 509 ntBASIC18.57■□□□□ 0.56
CCDC27Q2M243 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC27Q2M243 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CCDC27Q2M243 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC27Q2M243 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CCDC27Q2M243 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC27Q2M243 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CCDC27Q2M243 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC27Q2M243 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC27Q2M243 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC27Q2M243 CETP-203ENST00000566128 1733 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC27Q2M243 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC27Q2M243 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC27Q2M243 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC27Q2M243 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC27Q2M243 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC27Q2M243 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC27Q2M243 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC27Q2M243 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC27Q2M243 CROT-203ENST00000419147 2959 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC27Q2M243 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC27Q2M243 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC27Q2M243 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC27Q2M243 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC27Q2M243 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CCDC27Q2M243 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC27Q2M243 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CCDC27Q2M243 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC18.56■□□□□ 0.56
CCDC27Q2M243 RPSAP15-201ENST00000448168 861 ntBASIC18.56■□□□□ 0.56
CCDC27Q2M243 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC27Q2M243 RN7SL11P-201ENST00000471305 293 ntBASIC18.56■□□□□ 0.56
CCDC27Q2M243 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC18.56■□□□□ 0.56
CCDC27Q2M243 AC242376.1-201ENST00000559033 726 ntBASIC18.56■□□□□ 0.56
CCDC27Q2M243 CMC2-204ENST00000562713 573 ntTSL 3 BASIC18.56■□□□□ 0.56
CCDC27Q2M243 STUB1-204ENST00000564370 875 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC27Q2M243 CMC2-209ENST00000565108 399 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC27Q2M243 AC026803.1-201ENST00000569130 274 ntBASIC18.56■□□□□ 0.56
CCDC27Q2M243 NAT9-211ENST00000580632 799 ntTSL 3 BASIC18.56■□□□□ 0.56
CCDC27Q2M243 RN7SL574P-201ENST00000581512 297 ntBASIC18.56■□□□□ 0.56
CCDC27Q2M243 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CCDC27Q2M243 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC27Q2M243 AP001505.2-201ENST00000616815 443 ntBASIC18.56■□□□□ 0.56
CCDC27Q2M243 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC27Q2M243 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC18.56■□□□□ 0.56
CCDC27Q2M243 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC18.56■□□□□ 0.56
CCDC27Q2M243 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC27Q2M243 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms