Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.05□□□□□ -0.32
FREM3P0C091 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
FREM3P0C091 TBC1D3J-201ENST00000620719 1426 ntBASIC13.05□□□□□ -0.32
FREM3P0C091 MST1P2-201ENST00000457982 2291 ntBASIC13.05□□□□□ -0.32
FREM3P0C091 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.05□□□□□ -0.32
FREM3P0C091 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
FREM3P0C091 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.05□□□□□ -0.32
FREM3P0C091 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
FREM3P0C091 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
FREM3P0C091 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
FREM3P0C091 OR8T1P-201ENST00000421347 918 ntBASIC13.05□□□□□ -0.32
FREM3P0C091 NAGK-204ENST00000443872 878 ntTSL 3 BASIC13.05□□□□□ -0.32
FREM3P0C091 AP000358.1-201ENST00000456260 156 ntBASIC13.05□□□□□ -0.32
FREM3P0C091 RN7SL181P-201ENST00000462921 277 ntBASIC13.05□□□□□ -0.32
FREM3P0C091 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
FREM3P0C091 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC13.05□□□□□ -0.32
FREM3P0C091 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
FREM3P0C091 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
FREM3P0C091 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC13.05□□□□□ -0.32
FREM3P0C091 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
FREM3P0C091 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
FREM3P0C091 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.05□□□□□ -0.32
FREM3P0C091 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
FREM3P0C091 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
FREM3P0C091 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
FREM3P0C091 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
FREM3P0C091 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
FREM3P0C091 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.05□□□□□ -0.32
FREM3P0C091 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
FREM3P0C091 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
FREM3P0C091 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
FREM3P0C091 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
FREM3P0C091 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
FREM3P0C091 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
FREM3P0C091 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
FREM3P0C091 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
FREM3P0C091 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
FREM3P0C091 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
FREM3P0C091 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
FREM3P0C091 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
FREM3P0C091 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
FREM3P0C091 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC13.04□□□□□ -0.32
FREM3P0C091 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
FREM3P0C091 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC13.04□□□□□ -0.32
FREM3P0C091 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC13.04□□□□□ -0.32
FREM3P0C091 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC13.04□□□□□ -0.32
FREM3P0C091 NDUFS6P1-201ENST00000485187 316 ntBASIC13.04□□□□□ -0.32
FREM3P0C091 RN7SL720P-201ENST00000488178 304 ntBASIC13.04□□□□□ -0.32
FREM3P0C091 AC024681.1-201ENST00000521917 487 ntBASIC13.04□□□□□ -0.32
FREM3P0C091 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC13.04□□□□□ -0.32
FREM3P0C091 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
FREM3P0C091 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC13.04□□□□□ -0.32
FREM3P0C091 MIR3677-201ENST00000578964 60 ntBASIC13.04□□□□□ -0.32
FREM3P0C091 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
FREM3P0C091 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
FREM3P0C091 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
FREM3P0C091 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
FREM3P0C091 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
FREM3P0C091 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
FREM3P0C091 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
FREM3P0C091 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
FREM3P0C091 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
FREM3P0C091 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC13.04□□□□□ -0.32
FREM3P0C091 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
FREM3P0C091 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
FREM3P0C091 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
FREM3P0C091 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.04□□□□□ -0.32
FREM3P0C091 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.04□□□□□ -0.32
FREM3P0C091 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
FREM3P0C091 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
FREM3P0C091 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
FREM3P0C091 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
FREM3P0C091 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.04□□□□□ -0.32
FREM3P0C091 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
FREM3P0C091 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
FREM3P0C091 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
FREM3P0C091 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.04□□□□□ -0.32
FREM3P0C091 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
FREM3P0C091 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC13.04□□□□□ -0.32
FREM3P0C091 PFN2-206ENST00000461930 606 ntTSL 4 BASIC13.04□□□□□ -0.32
FREM3P0C091 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
FREM3P0C091 AC079328.1-201ENST00000560358 952 ntBASIC13.04□□□□□ -0.32
FREM3P0C091 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
FREM3P0C091 RPL17P45-201ENST00000586289 509 ntBASIC13.04□□□□□ -0.32
FREM3P0C091 NAP1L6-202ENST00000641404 1222 ntBASIC13.04□□□□□ -0.32
FREM3P0C091 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
FREM3P0C091 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
FREM3P0C091 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.04□□□□□ -0.32
FREM3P0C091 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
FREM3P0C091 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
FREM3P0C091 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.04□□□□□ -0.32
FREM3P0C091 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
FREM3P0C091 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
FREM3P0C091 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
FREM3P0C091 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
FREM3P0C091 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
FREM3P0C091 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
FREM3P0C091 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
FREM3P0C091 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
FREM3P0C091 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms