Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
TRGV3P03979 FAS-202ENST00000352159 1722 ntTSL 5 BASIC11.4□□□□□ -0.58
TRGV3P03979 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TRGV3P03979 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
TRGV3P03979 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC11.4□□□□□ -0.58
TRGV3P03979 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRGV3P03979 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
TRGV3P03979 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
TRGV3P03979 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
TRGV3P03979 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
TRGV3P03979 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
TRGV3P03979 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
TRGV3P03979 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
TRGV3P03979 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TRGV3P03979 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
TRGV3P03979 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TRGV3P03979 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TRGV3P03979 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC11.39□□□□□ -0.59
TRGV3P03979 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
TRGV3P03979 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
TRGV3P03979 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TRGV3P03979 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC11.39□□□□□ -0.59
TRGV3P03979 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TRGV3P03979 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TRGV3P03979 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
TRGV3P03979 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TRGV3P03979 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC11.39□□□□□ -0.59
TRGV3P03979 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TRGV3P03979 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TRGV3P03979 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
TRGV3P03979 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
TRGV3P03979 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
TRGV3P03979 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TRGV3P03979 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC11.39□□□□□ -0.59
TRGV3P03979 AL591846.1-201ENST00000451736 433 ntBASIC11.39□□□□□ -0.59
TRGV3P03979 AC104306.2-201ENST00000451877 341 ntBASIC11.39□□□□□ -0.59
TRGV3P03979 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC11.39□□□□□ -0.59
TRGV3P03979 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC11.39□□□□□ -0.59
TRGV3P03979 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
TRGV3P03979 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TRGV3P03979 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC11.39□□□□□ -0.59
TRGV3P03979 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC11.39□□□□□ -0.59
TRGV3P03979 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC11.39□□□□□ -0.59
TRGV3P03979 AC008805.1-201ENST00000590892 364 ntBASIC11.39□□□□□ -0.59
TRGV3P03979 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC11.39□□□□□ -0.59
TRGV3P03979 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC11.39□□□□□ -0.59
TRGV3P03979 AC011498.7-201ENST00000624986 2027 ntBASIC11.39□□□□□ -0.59
TRGV3P03979 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC11.39□□□□□ -0.59
TRGV3P03979 GSN-209ENST00000449733 2702 ntTSL 2 BASIC11.39□□□□□ -0.59
TRGV3P03979 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
TRGV3P03979 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TRGV3P03979 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TRGV3P03979 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TRGV3P03979 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TRGV3P03979 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
TRGV3P03979 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TRGV3P03979 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TRGV3P03979 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC11.39□□□□□ -0.59
TRGV3P03979 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC11.39□□□□□ -0.59
TRGV3P03979 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TRGV3P03979 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC11.39□□□□□ -0.59
TRGV3P03979 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC11.39□□□□□ -0.59
TRGV3P03979 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
TRGV3P03979 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TRGV3P03979 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
TRGV3P03979 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TRGV3P03979 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TRGV3P03979 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TRGV3P03979 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
TRGV3P03979 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV3P03979 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV3P03979 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV3P03979 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV3P03979 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV3P03979 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC11.38□□□□□ -0.59
TRGV3P03979 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
TRGV3P03979 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV3P03979 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV3P03979 REXO1L1P-201ENST00000379010 6598 ntBASIC11.38□□□□□ -0.59
TRGV3P03979 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
TRGV3P03979 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV3P03979 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV3P03979 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC11.38□□□□□ -0.59
TRGV3P03979 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
TRGV3P03979 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV3P03979 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV3P03979 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC11.38□□□□□ -0.59
TRGV3P03979 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
TRGV3P03979 AC090505.1-201ENST00000430515 1834 ntBASIC11.38□□□□□ -0.59
TRGV3P03979 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV3P03979 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC11.38□□□□□ -0.59
TRGV3P03979 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV3P03979 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
TRGV3P03979 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
TRGV3P03979 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC11.38□□□□□ -0.59
TRGV3P03979 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
TRGV3P03979 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV3P03979 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV3P03979 MIR1908-201ENST00000410394 80 ntBASIC11.38□□□□□ -0.59
TRGV3P03979 KRTAP10-13P-201ENST00000412914 571 ntBASIC11.38□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms