Protein–RNA interactions for Protein: Q9UD57

NKX1-2, NK1 transcription factor-related protein 2, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-2Q9UD57 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 CYP4F11-201ENST00000248041 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 WIPF3-201ENST00000242140 4184 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 SARS-202ENST00000369923 1882 ntTSL 5 BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 ORMDL2-201ENST00000243045 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 TUBB3P1-201ENST00000405796 1332 ntBASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 AC138969.2-201ENST00000532739 9932 ntBASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 SALL4P6-201ENST00000429385 1691 ntBASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 EDARADD-204ENST00000637660 2803 ntTSL 5 BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 SPDYE11-202ENST00000450699 704 ntBASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 GCOM2-201ENST00000509133 1104 ntBASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 IGHV3-22-201ENST00000520721 359 ntBASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 SPDYE9P-201ENST00000570642 692 ntBASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 AC104506.1-201ENST00000609247 429 ntBASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 SPDYE10P-202ENST00000612005 668 ntBASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 SPDYE8P-202ENST00000612377 668 ntBASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 AC018529.1-201ENST00000613063 361 ntBASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 ELN-216ENST00000429192 3298 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 MARCH10-209ENST00000583600 3214 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC13.67□□□□□ -0.22
NKX1-2Q9UD57 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 ABL2-210ENST00000511413 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 RGPD5-203ENST00000393283 3304 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 C14orf159-219ENST00000521077 2719 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 AL162391.1-201ENST00000419853 2102 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 LNP1-201ENST00000383693 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX1-2Q9UD57 CORO7-PAM16-202ENST00000572467 3284 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms