Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC16.33■□□□□ 0.2
HDAC6Q9UBN7 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HDAC6Q9UBN7 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC16.33■□□□□ 0.2
HDAC6Q9UBN7 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HDAC6Q9UBN7 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HDAC6Q9UBN7 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC16.33■□□□□ 0.2
HDAC6Q9UBN7 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
HDAC6Q9UBN7 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.32■□□□□ 0.2
HDAC6Q9UBN7 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC16.32■□□□□ 0.2
HDAC6Q9UBN7 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.32■□□□□ 0.2
HDAC6Q9UBN7 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HDAC6Q9UBN7 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HDAC6Q9UBN7 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HDAC6Q9UBN7 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HDAC6Q9UBN7 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HDAC6Q9UBN7 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HDAC6Q9UBN7 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HDAC6Q9UBN7 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HDAC6Q9UBN7 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC16.32■□□□□ 0.2
HDAC6Q9UBN7 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HDAC6Q9UBN7 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HDAC6Q9UBN7 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
HDAC6Q9UBN7 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
HDAC6Q9UBN7 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HDAC6Q9UBN7 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HDAC6Q9UBN7 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HDAC6Q9UBN7 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HDAC6Q9UBN7 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.32■□□□□ 0.2
HDAC6Q9UBN7 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HDAC6Q9UBN7 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HDAC6Q9UBN7 NOC2LP1-201ENST00000450578 752 ntBASIC16.32■□□□□ 0.2
HDAC6Q9UBN7 RN7SL258P-201ENST00000478664 300 ntBASIC16.32■□□□□ 0.2
HDAC6Q9UBN7 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC16.32■□□□□ 0.2
HDAC6Q9UBN7 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC16.32■□□□□ 0.2
HDAC6Q9UBN7 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
HDAC6Q9UBN7 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HDAC6Q9UBN7 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC16.32■□□□□ 0.2
HDAC6Q9UBN7 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.32■□□□□ 0.2
HDAC6Q9UBN7 WDR7-208ENST00000589935 544 ntTSL 4 BASIC16.32■□□□□ 0.2
HDAC6Q9UBN7 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.32■□□□□ 0.2
HDAC6Q9UBN7 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.32■□□□□ 0.2
HDAC6Q9UBN7 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HDAC6Q9UBN7 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HDAC6Q9UBN7 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC16.32■□□□□ 0.2
HDAC6Q9UBN7 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 TMBIM7P-202ENST00000641474 1516 ntBASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 NCR3-202ENST00000376071 541 ntTSL 5 BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 RN7SL67P-201ENST00000492147 296 ntBASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 AC089987.1-201ENST00000551654 2209 ntBASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HDAC6Q9UBN7 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms