Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 MIR4746-201ENST00000579802 71 ntBASIC20.12■□□□□ 0.81
SLC52A1Q9NWF4 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC20.12■□□□□ 0.81
SLC52A1Q9NWF4 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SLC52A1Q9NWF4 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SLC52A1Q9NWF4 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC52A1Q9NWF4 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC52A1Q9NWF4 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC52A1Q9NWF4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC52A1Q9NWF4 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
SLC52A1Q9NWF4 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC52A1Q9NWF4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC52A1Q9NWF4 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SLC52A1Q9NWF4 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SLC52A1Q9NWF4 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC52A1Q9NWF4 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC52A1Q9NWF4 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC52A1Q9NWF4 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SLC52A1Q9NWF4 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC52A1Q9NWF4 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SLC52A1Q9NWF4 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SLC52A1Q9NWF4 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
SLC52A1Q9NWF4 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SLC52A1Q9NWF4 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SLC52A1Q9NWF4 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SLC52A1Q9NWF4 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SLC52A1Q9NWF4 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC52A1Q9NWF4 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC52A1Q9NWF4 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
SLC52A1Q9NWF4 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC52A1Q9NWF4 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC52A1Q9NWF4 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC52A1Q9NWF4 CDCA4P4-201ENST00000435216 680 ntBASIC20.11■□□□□ 0.81
SLC52A1Q9NWF4 MIR2278-201ENST00000516344 96 ntBASIC20.11■□□□□ 0.81
SLC52A1Q9NWF4 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SLC52A1Q9NWF4 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC20.11■□□□□ 0.81
SLC52A1Q9NWF4 FBXO36P1-201ENST00000579006 471 ntBASIC20.11■□□□□ 0.81
SLC52A1Q9NWF4 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
SLC52A1Q9NWF4 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC52A1Q9NWF4 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC52A1Q9NWF4 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC52A1Q9NWF4 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SLC52A1Q9NWF4 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SLC52A1Q9NWF4 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC52A1Q9NWF4 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC20.11■□□□□ 0.81
SLC52A1Q9NWF4 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC20.11■□□□□ 0.81
SLC52A1Q9NWF4 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC52A1Q9NWF4 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC52A1Q9NWF4 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC52A1Q9NWF4 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC52A1Q9NWF4 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC52A1Q9NWF4 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC52A1Q9NWF4 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC52A1Q9NWF4 FGD5P1-202ENST00000614866 2498 ntBASIC20.1■□□□□ 0.81
SLC52A1Q9NWF4 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC52A1Q9NWF4 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC52A1Q9NWF4 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC52A1Q9NWF4 AC008536.3-201ENST00000623282 1599 ntBASIC20.1■□□□□ 0.81
SLC52A1Q9NWF4 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SLC52A1Q9NWF4 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
SLC52A1Q9NWF4 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC20.1■□□□□ 0.81
SLC52A1Q9NWF4 AC103563.1-201ENST00000429316 123 ntBASIC20.1■□□□□ 0.81
SLC52A1Q9NWF4 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC20.1■□□□□ 0.81
SLC52A1Q9NWF4 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC20.1■□□□□ 0.81
SLC52A1Q9NWF4 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC20.1■□□□□ 0.81
SLC52A1Q9NWF4 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC20.1■□□□□ 0.81
SLC52A1Q9NWF4 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC20.1■□□□□ 0.81
SLC52A1Q9NWF4 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC20.1■□□□□ 0.81
SLC52A1Q9NWF4 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC52A1Q9NWF4 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SLC52A1Q9NWF4 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC52A1Q9NWF4 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC52A1Q9NWF4 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC52A1Q9NWF4 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC20.1■□□□□ 0.81
SLC52A1Q9NWF4 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SLC52A1Q9NWF4 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC20.1■□□□□ 0.81
SLC52A1Q9NWF4 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC52A1Q9NWF4 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC52A1Q9NWF4 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SLC52A1Q9NWF4 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC52A1Q9NWF4 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC52A1Q9NWF4 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC52A1Q9NWF4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC52A1Q9NWF4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SLC52A1Q9NWF4 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC20.1■□□□□ 0.81
SLC52A1Q9NWF4 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
SLC52A1Q9NWF4 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC20.09■□□□□ 0.81
SLC52A1Q9NWF4 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC20.09■□□□□ 0.81
SLC52A1Q9NWF4 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
SLC52A1Q9NWF4 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SLC52A1Q9NWF4 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC52A1Q9NWF4 AC133141.1-201ENST00000443015 339 ntBASIC20.09■□□□□ 0.81
SLC52A1Q9NWF4 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC20.09■□□□□ 0.81
SLC52A1Q9NWF4 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC20.09■□□□□ 0.81
SLC52A1Q9NWF4 AC026120.2-201ENST00000617239 309 ntBASIC20.09■□□□□ 0.81
SLC52A1Q9NWF4 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC20.09■□□□□ 0.81
SLC52A1Q9NWF4 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC20.09■□□□□ 0.81
SLC52A1Q9NWF4 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC20.09■□□□□ 0.81
SLC52A1Q9NWF4 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC52A1Q9NWF4 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC52A1Q9NWF4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms