Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
TRMT13Q9NUP7 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 TCAF2P1-201ENST00000291129 2421 ntBASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 SURF4-203ENST00000371991 715 ntTSL 3 BASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 MIR566-201ENST00000385187 94 ntBASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 AC008026.2-201ENST00000495438 348 ntBASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 RPS23-207ENST00000511844 530 ntTSL 2 BASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 MIR4265-201ENST00000582152 99 ntBASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 AP005212.2-201ENST00000584979 510 ntBASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
TRMT13Q9NUP7 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 AC006529.1-201ENST00000459978 637 ntBASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 AC063952.3-201ENST00000467756 308 ntBASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 CMC2-204ENST00000562713 573 ntTSL 3 BASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 CMC2-209ENST00000565108 399 ntTSL 2 BASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 AC006548.2-201ENST00000605217 529 ntBASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 PDXDC2P-206ENST00000534700 1315 ntBASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 AC022532.1-201ENST00000624563 1728 ntBASIC15.63■□□□□ 0.09
TRMT13Q9NUP7 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms