Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH11XQ9BZA7 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH11XQ9BZA7 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDH11XQ9BZA7 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
PCDH11XQ9BZA7 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH11XQ9BZA7 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PCDH11XQ9BZA7 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH11XQ9BZA7 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH11XQ9BZA7 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH11XQ9BZA7 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDH11XQ9BZA7 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
PCDH11XQ9BZA7 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDH11XQ9BZA7 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDH11XQ9BZA7 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDH11XQ9BZA7 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDH11XQ9BZA7 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC18.33■□□□□ 0.53
PCDH11XQ9BZA7 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDH11XQ9BZA7 AC022080.1-201ENST00000366255 781 ntBASIC18.33■□□□□ 0.53
PCDH11XQ9BZA7 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC18.33■□□□□ 0.53
PCDH11XQ9BZA7 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC18.33■□□□□ 0.53
PCDH11XQ9BZA7 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC18.33■□□□□ 0.53
PCDH11XQ9BZA7 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDH11XQ9BZA7 RPL3P5-201ENST00000441645 1232 ntBASIC18.33■□□□□ 0.53
PCDH11XQ9BZA7 RN7SL128P-201ENST00000467883 305 ntBASIC18.33■□□□□ 0.53
PCDH11XQ9BZA7 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC18.33■□□□□ 0.53
PCDH11XQ9BZA7 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDH11XQ9BZA7 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC18.33■□□□□ 0.53
PCDH11XQ9BZA7 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC18.33■□□□□ 0.53
PCDH11XQ9BZA7 HNRNPA1P5-201ENST00000558213 966 ntBASIC18.33■□□□□ 0.53
PCDH11XQ9BZA7 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC18.33■□□□□ 0.53
PCDH11XQ9BZA7 AC073869.4-201ENST00000620841 800 ntBASIC18.33■□□□□ 0.53
PCDH11XQ9BZA7 AC015909.5-201ENST00000624336 2266 ntBASIC18.33■□□□□ 0.52
PCDH11XQ9BZA7 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDH11XQ9BZA7 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH11XQ9BZA7 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH11XQ9BZA7 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH11XQ9BZA7 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
PCDH11XQ9BZA7 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDH11XQ9BZA7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH11XQ9BZA7 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDH11XQ9BZA7 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDH11XQ9BZA7 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDH11XQ9BZA7 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH11XQ9BZA7 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
PCDH11XQ9BZA7 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH11XQ9BZA7 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDH11XQ9BZA7 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH11XQ9BZA7 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH11XQ9BZA7 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDH11XQ9BZA7 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PCDH11XQ9BZA7 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH11XQ9BZA7 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH11XQ9BZA7 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH11XQ9BZA7 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH11XQ9BZA7 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH11XQ9BZA7 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH11XQ9BZA7 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC18.32■□□□□ 0.52
PCDH11XQ9BZA7 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDH11XQ9BZA7 NME6-208ENST00000435684 599 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDH11XQ9BZA7 AC092903.1-201ENST00000466506 262 ntBASIC18.32■□□□□ 0.52
PCDH11XQ9BZA7 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC18.32■□□□□ 0.52
PCDH11XQ9BZA7 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH11XQ9BZA7 MBP-238ENST00000580402 915 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDH11XQ9BZA7 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH11XQ9BZA7 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PCDH11XQ9BZA7 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDH11XQ9BZA7 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDH11XQ9BZA7 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH11XQ9BZA7 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDH11XQ9BZA7 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH11XQ9BZA7 AC068760.1-201ENST00000493579 1953 ntBASIC18.32■□□□□ 0.52
PCDH11XQ9BZA7 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH11XQ9BZA7 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH11XQ9BZA7 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH11XQ9BZA7 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH11XQ9BZA7 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH11XQ9BZA7 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
PCDH11XQ9BZA7 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH11XQ9BZA7 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PCDH11XQ9BZA7 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDH11XQ9BZA7 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH11XQ9BZA7 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDH11XQ9BZA7 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PCDH11XQ9BZA7 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH11XQ9BZA7 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PCDH11XQ9BZA7 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PCDH11XQ9BZA7 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDH11XQ9BZA7 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH11XQ9BZA7 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PCDH11XQ9BZA7 AC126177.1-201ENST00000547829 2218 ntBASIC18.31■□□□□ 0.52
PCDH11XQ9BZA7 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PCDH11XQ9BZA7 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH11XQ9BZA7 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH11XQ9BZA7 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDH11XQ9BZA7 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH11XQ9BZA7 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH11XQ9BZA7 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDH11XQ9BZA7 AF274858.1-201ENST00000406288 372 ntBASIC18.31■□□□□ 0.52
PCDH11XQ9BZA7 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDH11XQ9BZA7 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms