Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
HPS1Q92902 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HPS1Q92902 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HPS1Q92902 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.4□□□□□ -0.26
HPS1Q92902 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HPS1Q92902 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HPS1Q92902 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HPS1Q92902 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.4□□□□□ -0.26
HPS1Q92902 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HPS1Q92902 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HPS1Q92902 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HPS1Q92902 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
HPS1Q92902 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.4□□□□□ -0.27
HPS1Q92902 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HPS1Q92902 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
HPS1Q92902 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HPS1Q92902 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.39□□□□□ -0.27
HPS1Q92902 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.39□□□□□ -0.27
HPS1Q92902 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HPS1Q92902 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HPS1Q92902 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.39□□□□□ -0.27
HPS1Q92902 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
HPS1Q92902 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC13.39□□□□□ -0.27
HPS1Q92902 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HPS1Q92902 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HPS1Q92902 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HPS1Q92902 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HPS1Q92902 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
HPS1Q92902 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HPS1Q92902 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HPS1Q92902 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HPS1Q92902 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HPS1Q92902 DGCR5-201ENST00000399539 862 ntBASIC13.39□□□□□ -0.27
HPS1Q92902 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.39□□□□□ -0.27
HPS1Q92902 AL512384.1-201ENST00000406683 331 ntBASIC13.39□□□□□ -0.27
HPS1Q92902 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
HPS1Q92902 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.39□□□□□ -0.27
HPS1Q92902 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.39□□□□□ -0.27
HPS1Q92902 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.39□□□□□ -0.27
HPS1Q92902 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HPS1Q92902 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.39□□□□□ -0.27
HPS1Q92902 TPRX2P-201ENST00000535362 881 ntBASIC13.39□□□□□ -0.27
HPS1Q92902 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.39□□□□□ -0.27
HPS1Q92902 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HPS1Q92902 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HPS1Q92902 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.39□□□□□ -0.27
HPS1Q92902 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.39□□□□□ -0.27
HPS1Q92902 AL137246.1-201ENST00000607072 977 ntBASIC13.39□□□□□ -0.27
HPS1Q92902 AC004908.3-201ENST00000610248 625 ntBASIC13.39□□□□□ -0.27
HPS1Q92902 AC004461.2-201ENST00000629517 803 ntBASIC13.39□□□□□ -0.27
HPS1Q92902 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.39□□□□□ -0.27
HPS1Q92902 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HPS1Q92902 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HPS1Q92902 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HPS1Q92902 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HPS1Q92902 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HPS1Q92902 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
HPS1Q92902 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC13.39□□□□□ -0.27
HPS1Q92902 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HPS1Q92902 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
HPS1Q92902 STRCP1-201ENST00000509801 5328 ntBASIC13.39□□□□□ -0.27
HPS1Q92902 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HPS1Q92902 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HPS1Q92902 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HPS1Q92902 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HPS1Q92902 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC13.39□□□□□ -0.27
HPS1Q92902 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HPS1Q92902 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HPS1Q92902 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.39□□□□□ -0.27
HPS1Q92902 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HPS1Q92902 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HPS1Q92902 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HPS1Q92902 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
HPS1Q92902 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HPS1Q92902 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.38□□□□□ -0.27
HPS1Q92902 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
HPS1Q92902 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
HPS1Q92902 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC13.38□□□□□ -0.27
HPS1Q92902 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
HPS1Q92902 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HPS1Q92902 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HPS1Q92902 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
HPS1Q92902 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HPS1Q92902 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.38□□□□□ -0.27
HPS1Q92902 AC055811.4-201ENST00000624039 1754 ntBASIC13.38□□□□□ -0.27
HPS1Q92902 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
HPS1Q92902 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC13.38□□□□□ -0.27
HPS1Q92902 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HPS1Q92902 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
HPS1Q92902 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HPS1Q92902 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.38□□□□□ -0.27
HPS1Q92902 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HPS1Q92902 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HPS1Q92902 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC13.38□□□□□ -0.27
HPS1Q92902 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HPS1Q92902 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
HPS1Q92902 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.38□□□□□ -0.27
HPS1Q92902 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HPS1Q92902 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HPS1Q92902 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms