Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RPGRQ92834 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC17.55■□□□□ 0.4
RPGRQ92834 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RPGRQ92834 AL512310.5-201ENST00000551999 515 ntBASIC17.55■□□□□ 0.4
RPGRQ92834 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC17.55■□□□□ 0.4
RPGRQ92834 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC17.55■□□□□ 0.4
RPGRQ92834 COX5A-205ENST00000568517 582 ntTSL 3 BASIC17.55■□□□□ 0.4
RPGRQ92834 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC17.55■□□□□ 0.4
RPGRQ92834 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RPGRQ92834 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC17.55■□□□□ 0.4
RPGRQ92834 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPGRQ92834 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RPGRQ92834 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPGRQ92834 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RPGRQ92834 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPGRQ92834 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPGRQ92834 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPGRQ92834 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RPGRQ92834 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPGRQ92834 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC17.55■□□□□ 0.4
RPGRQ92834 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC17.54■□□□□ 0.4
RPGRQ92834 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC17.54■□□□□ 0.4
RPGRQ92834 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.54■□□□□ 0.4
RPGRQ92834 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RPGRQ92834 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RPGRQ92834 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RPGRQ92834 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.54■□□□□ 0.4
RPGRQ92834 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC17.54■□□□□ 0.4
RPGRQ92834 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RPGRQ92834 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RPGRQ92834 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.54■□□□□ 0.4
RPGRQ92834 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.54■□□□□ 0.4
RPGRQ92834 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RPGRQ92834 MIR1301-201ENST00000408518 82 ntBASIC17.54■□□□□ 0.4
RPGRQ92834 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC17.54■□□□□ 0.4
RPGRQ92834 PRSS3P1-201ENST00000503996 742 ntBASIC17.54■□□□□ 0.4
RPGRQ92834 RPS23-207ENST00000511844 530 ntTSL 2 BASIC17.54■□□□□ 0.4
RPGRQ92834 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC17.54■□□□□ 0.4
RPGRQ92834 AL132994.1-201ENST00000554098 400 ntBASIC17.54■□□□□ 0.4
RPGRQ92834 MT2A-202ENST00000561491 581 ntTSL 2 BASIC17.54■□□□□ 0.4
RPGRQ92834 NT5C-204ENST00000578337 582 ntTSL 2 BASIC17.54■□□□□ 0.4
RPGRQ92834 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC17.54■□□□□ 0.4
RPGRQ92834 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RPGRQ92834 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RPGRQ92834 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
RPGRQ92834 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RPGRQ92834 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
RPGRQ92834 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RPGRQ92834 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC17.54■□□□□ 0.4
RPGRQ92834 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC17.54■□□□□ 0.4
RPGRQ92834 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RPGRQ92834 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC17.54■□□□□ 0.4
RPGRQ92834 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RPGRQ92834 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RPGRQ92834 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC17.54■□□□□ 0.4
RPGRQ92834 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
RPGRQ92834 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC17.54■□□□□ 0.4
RPGRQ92834 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RPGRQ92834 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPGRQ92834 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPGRQ92834 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC17.53■□□□□ 0.4
RPGRQ92834 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC17.53■□□□□ 0.4
RPGRQ92834 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPGRQ92834 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPGRQ92834 AC232323.1-201ENST00000540724 2099 ntBASIC17.53■□□□□ 0.4
RPGRQ92834 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPGRQ92834 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPGRQ92834 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RPGRQ92834 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC17.53■□□□□ 0.4
RPGRQ92834 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RPGRQ92834 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RPGRQ92834 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC17.53■□□□□ 0.4
RPGRQ92834 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC17.53■□□□□ 0.4
RPGRQ92834 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC17.53■□□□□ 0.4
RPGRQ92834 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPGRQ92834 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC17.53■□□□□ 0.4
RPGRQ92834 ALG1L3P-201ENST00000503331 765 ntBASIC17.53■□□□□ 0.4
RPGRQ92834 EEF1GP8-201ENST00000506566 1154 ntBASIC17.53■□□□□ 0.4
RPGRQ92834 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RPGRQ92834 AC022447.6-201ENST00000515522 438 ntBASIC17.53■□□□□ 0.4
RPGRQ92834 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC17.53■□□□□ 0.4
RPGRQ92834 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC17.53■□□□□ 0.4
RPGRQ92834 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
RPGRQ92834 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC17.53■□□□□ 0.4
RPGRQ92834 AL009176.1-201ENST00000607876 650 ntBASIC17.53■□□□□ 0.4
RPGRQ92834 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.53■□□□□ 0.4
RPGRQ92834 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPGRQ92834 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPGRQ92834 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RPGRQ92834 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RPGRQ92834 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPGRQ92834 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
RPGRQ92834 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RPGRQ92834 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPGRQ92834 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC17.53■□□□□ 0.4
RPGRQ92834 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPGRQ92834 AL109809.1-201ENST00000418979 1367 ntBASIC17.53■□□□□ 0.4
RPGRQ92834 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RPGRQ92834 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC17.52■□□□□ 0.4
RPGRQ92834 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms