Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHC3Q92529 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SHC3Q92529 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC15.31■□□□□ 0.04
SHC3Q92529 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC15.31■□□□□ 0.04
SHC3Q92529 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHC3Q92529 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SHC3Q92529 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHC3Q92529 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
SHC3Q92529 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC15.31■□□□□ 0.04
SHC3Q92529 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHC3Q92529 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHC3Q92529 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.31■□□□□ 0.04
SHC3Q92529 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.31■□□□□ 0.04
SHC3Q92529 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.31■□□□□ 0.04
SHC3Q92529 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHC3Q92529 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.31■□□□□ 0.04
SHC3Q92529 HMGA1P1-201ENST00000415560 1062 ntBASIC15.31■□□□□ 0.04
SHC3Q92529 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC15.31■□□□□ 0.04
SHC3Q92529 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC15.31■□□□□ 0.04
SHC3Q92529 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.31■□□□□ 0.04
SHC3Q92529 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.31■□□□□ 0.04
SHC3Q92529 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC15.31■□□□□ 0.04
SHC3Q92529 AC009779.1-201ENST00000551138 283 ntBASIC15.31■□□□□ 0.04
SHC3Q92529 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.31■□□□□ 0.04
SHC3Q92529 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SHC3Q92529 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.31■□□□□ 0.04
SHC3Q92529 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.31■□□□□ 0.04
SHC3Q92529 KRT18P8-201ENST00000581937 1246 ntBASIC15.31■□□□□ 0.04
SHC3Q92529 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.31■□□□□ 0.04
SHC3Q92529 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHC3Q92529 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHC3Q92529 LINC00115-201ENST00000473798 1317 ntBASIC15.31■□□□□ 0.04
SHC3Q92529 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SHC3Q92529 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHC3Q92529 RAN-210ENST00000541630 1475 ntTSL 2 BASIC15.31■□□□□ 0.04
SHC3Q92529 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SHC3Q92529 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SHC3Q92529 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC15.31■□□□□ 0.04
SHC3Q92529 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHC3Q92529 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC15.31■□□□□ 0.04
SHC3Q92529 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.31■□□□□ 0.04
SHC3Q92529 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHC3Q92529 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHC3Q92529 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHC3Q92529 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC15.31■□□□□ 0.04
SHC3Q92529 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC15.3■□□□□ 0.04
SHC3Q92529 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SHC3Q92529 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHC3Q92529 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC15.3■□□□□ 0.04
SHC3Q92529 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHC3Q92529 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHC3Q92529 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHC3Q92529 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHC3Q92529 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHC3Q92529 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
SHC3Q92529 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SHC3Q92529 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHC3Q92529 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHC3Q92529 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.3■□□□□ 0.04
SHC3Q92529 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.3■□□□□ 0.04
SHC3Q92529 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC15.3■□□□□ 0.04
SHC3Q92529 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHC3Q92529 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SHC3Q92529 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SHC3Q92529 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SHC3Q92529 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.3■□□□□ 0.04
SHC3Q92529 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHC3Q92529 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC15.3■□□□□ 0.04
SHC3Q92529 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.3■□□□□ 0.04
SHC3Q92529 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC15.3■□□□□ 0.04
SHC3Q92529 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC15.3■□□□□ 0.04
SHC3Q92529 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC15.3■□□□□ 0.04
SHC3Q92529 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHC3Q92529 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SHC3Q92529 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHC3Q92529 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SHC3Q92529 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SHC3Q92529 SERPINA13P-202ENST00000478994 924 ntBASIC15.3■□□□□ 0.04
SHC3Q92529 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC15.3■□□□□ 0.04
SHC3Q92529 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC15.3■□□□□ 0.04
SHC3Q92529 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.3■□□□□ 0.04
SHC3Q92529 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.3■□□□□ 0.04
SHC3Q92529 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC15.3■□□□□ 0.04
SHC3Q92529 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC15.3■□□□□ 0.04
SHC3Q92529 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.3■□□□□ 0.04
SHC3Q92529 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.3■□□□□ 0.04
SHC3Q92529 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SHC3Q92529 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHC3Q92529 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHC3Q92529 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
SHC3Q92529 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SHC3Q92529 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHC3Q92529 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC15.29■□□□□ 0.04
SHC3Q92529 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SHC3Q92529 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SHC3Q92529 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHC3Q92529 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHC3Q92529 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SHC3Q92529 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.29■□□□□ 0.04
SHC3Q92529 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms