Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 PCDHB19P-202ENST00000625133 2914 ntBASIC12.53□□□□□ -0.4
BEST4Q8NFU0 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 AL136172.1-201ENST00000598590 1394 ntBASIC12.53□□□□□ -0.4
BEST4Q8NFU0 SALL4P5-201ENST00000419001 1760 ntBASIC12.53□□□□□ -0.4
BEST4Q8NFU0 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.53□□□□□ -0.4
BEST4Q8NFU0 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.53□□□□□ -0.4
BEST4Q8NFU0 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
BEST4Q8NFU0 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
BEST4Q8NFU0 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
BEST4Q8NFU0 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
BEST4Q8NFU0 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
BEST4Q8NFU0 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
BEST4Q8NFU0 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
BEST4Q8NFU0 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
BEST4Q8NFU0 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
BEST4Q8NFU0 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
BEST4Q8NFU0 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
BEST4Q8NFU0 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC12.52□□□□□ -0.41
BEST4Q8NFU0 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
BEST4Q8NFU0 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.52□□□□□ -0.41
BEST4Q8NFU0 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
BEST4Q8NFU0 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
BEST4Q8NFU0 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC12.52□□□□□ -0.41
BEST4Q8NFU0 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
BEST4Q8NFU0 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
BEST4Q8NFU0 AC026410.3-201ENST00000514280 936 ntBASIC12.52□□□□□ -0.41
BEST4Q8NFU0 RAB35-202ENST00000534951 939 ntTSL 2 BASIC12.52□□□□□ -0.41
BEST4Q8NFU0 DAD1-205ENST00000543337 501 ntTSL 3 BASIC12.52□□□□□ -0.41
BEST4Q8NFU0 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
BEST4Q8NFU0 DUX4L47-201ENST00000566374 394 ntBASIC12.52□□□□□ -0.41
BEST4Q8NFU0 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC12.52□□□□□ -0.41
BEST4Q8NFU0 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
BEST4Q8NFU0 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
BEST4Q8NFU0 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12.52□□□□□ -0.41
BEST4Q8NFU0 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC12.52□□□□□ -0.41
BEST4Q8NFU0 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
BEST4Q8NFU0 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
BEST4Q8NFU0 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC12.52□□□□□ -0.41
BEST4Q8NFU0 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.52□□□□□ -0.41
BEST4Q8NFU0 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
BEST4Q8NFU0 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC12.52□□□□□ -0.41
BEST4Q8NFU0 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
BEST4Q8NFU0 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.52□□□□□ -0.41
BEST4Q8NFU0 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
BEST4Q8NFU0 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
BEST4Q8NFU0 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC12.52□□□□□ -0.41
BEST4Q8NFU0 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC12.52□□□□□ -0.41
BEST4Q8NFU0 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
BEST4Q8NFU0 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
BEST4Q8NFU0 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
BEST4Q8NFU0 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC12.52□□□□□ -0.41
BEST4Q8NFU0 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
BEST4Q8NFU0 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
BEST4Q8NFU0 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
BEST4Q8NFU0 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BEST4Q8NFU0 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC12.51□□□□□ -0.41
BEST4Q8NFU0 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BEST4Q8NFU0 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
BEST4Q8NFU0 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
BEST4Q8NFU0 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
BEST4Q8NFU0 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.51□□□□□ -0.41
BEST4Q8NFU0 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BEST4Q8NFU0 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
BEST4Q8NFU0 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BEST4Q8NFU0 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
BEST4Q8NFU0 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
BEST4Q8NFU0 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
BEST4Q8NFU0 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BEST4Q8NFU0 REXO1L1P-201ENST00000379010 6598 ntBASIC12.51□□□□□ -0.41
BEST4Q8NFU0 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.51□□□□□ -0.41
BEST4Q8NFU0 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
BEST4Q8NFU0 AL022323.5-201ENST00000624101 2059 ntBASIC12.51□□□□□ -0.41
BEST4Q8NFU0 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BEST4Q8NFU0 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC12.51□□□□□ -0.41
BEST4Q8NFU0 AL139400.1-201ENST00000366220 510 ntBASIC12.51□□□□□ -0.41
BEST4Q8NFU0 HNRNPFP1-201ENST00000391730 1133 ntBASIC12.51□□□□□ -0.41
BEST4Q8NFU0 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
BEST4Q8NFU0 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.51□□□□□ -0.41
BEST4Q8NFU0 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC12.51□□□□□ -0.41
BEST4Q8NFU0 AC007969.1-201ENST00000433675 447 ntBASIC12.51□□□□□ -0.41
BEST4Q8NFU0 AC114501.2-201ENST00000439631 535 ntBASIC12.51□□□□□ -0.41
BEST4Q8NFU0 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.51□□□□□ -0.41
BEST4Q8NFU0 CNN2P2-201ENST00000443536 909 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms