Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
OTOP1Q7RTM1 AL109809.1-201ENST00000418979 1367 ntBASIC16.51■□□□□ 0.23
OTOP1Q7RTM1 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
OTOP1Q7RTM1 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 AP001267.2-201ENST00000532619 2086 ntBASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 LINC00552-201ENST00000625151 2579 ntBASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 TPT1P11-201ENST00000458482 498 ntBASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 AC090136.2-201ENST00000517809 420 ntBASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 TRMT112P3-201ENST00000580149 358 ntBASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC16.5■□□□□ 0.23
OTOP1Q7RTM1 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
OTOP1Q7RTM1 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
OTOP1Q7RTM1 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
OTOP1Q7RTM1 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
OTOP1Q7RTM1 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
OTOP1Q7RTM1 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
OTOP1Q7RTM1 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
OTOP1Q7RTM1 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
OTOP1Q7RTM1 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
OTOP1Q7RTM1 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
OTOP1Q7RTM1 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
OTOP1Q7RTM1 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
OTOP1Q7RTM1 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
OTOP1Q7RTM1 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
OTOP1Q7RTM1 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC16.49■□□□□ 0.23
OTOP1Q7RTM1 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
OTOP1Q7RTM1 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
OTOP1Q7RTM1 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC16.49■□□□□ 0.23
OTOP1Q7RTM1 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.49■□□□□ 0.23
OTOP1Q7RTM1 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
OTOP1Q7RTM1 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC16.49■□□□□ 0.23
OTOP1Q7RTM1 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
OTOP1Q7RTM1 AL451000.1-201ENST00000451300 1186 ntBASIC16.49■□□□□ 0.23
OTOP1Q7RTM1 BPIFB5P-201ENST00000457066 1099 ntBASIC16.49■□□□□ 0.23
OTOP1Q7RTM1 CASP3-205ENST00000517513 964 ntTSL 5 BASIC16.49■□□□□ 0.23
OTOP1Q7RTM1 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
OTOP1Q7RTM1 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC16.49■□□□□ 0.23
OTOP1Q7RTM1 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.49■□□□□ 0.23
OTOP1Q7RTM1 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
OTOP1Q7RTM1 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC16.49■□□□□ 0.23
OTOP1Q7RTM1 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
OTOP1Q7RTM1 RN7SL121P-201ENST00000584223 273 ntBASIC16.49■□□□□ 0.23
OTOP1Q7RTM1 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
OTOP1Q7RTM1 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC16.49■□□□□ 0.23
OTOP1Q7RTM1 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC16.49■□□□□ 0.23
OTOP1Q7RTM1 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
OTOP1Q7RTM1 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
OTOP1Q7RTM1 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
OTOP1Q7RTM1 AC215219.1-201ENST00000400706 1817 ntBASIC16.49■□□□□ 0.23
OTOP1Q7RTM1 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.49■□□□□ 0.23
OTOP1Q7RTM1 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
OTOP1Q7RTM1 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
OTOP1Q7RTM1 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms