Protein–RNA interactions for Protein: Q68CJ9

CREB3L3, Cyclic AMP-responsive element-binding protein 3-like protein 3, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3L3Q68CJ9 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 DPM3-202ENST00000368399 517 ntBASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 AC140658.4-201ENST00000561990 352 ntBASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 AC090164.2-201ENST00000611487 516 ntBASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CREB3L3Q68CJ9 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CREB3L3Q68CJ9 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CREB3L3Q68CJ9 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
CREB3L3Q68CJ9 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC17.08■□□□□ 0.33
CREB3L3Q68CJ9 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
CREB3L3Q68CJ9 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CREB3L3Q68CJ9 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CREB3L3Q68CJ9 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
CREB3L3Q68CJ9 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CREB3L3Q68CJ9 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.08■□□□□ 0.32
CREB3L3Q68CJ9 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC17.08■□□□□ 0.32
CREB3L3Q68CJ9 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CREB3L3Q68CJ9 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CREB3L3Q68CJ9 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.08■□□□□ 0.32
CREB3L3Q68CJ9 AC078875.1-201ENST00000431907 724 ntBASIC17.08■□□□□ 0.32
CREB3L3Q68CJ9 RPS2P32-201ENST00000439199 892 ntBASIC17.08■□□□□ 0.32
CREB3L3Q68CJ9 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CREB3L3Q68CJ9 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CREB3L3Q68CJ9 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CREB3L3Q68CJ9 FAM8A2P-201ENST00000528813 1142 ntBASIC17.08■□□□□ 0.32
CREB3L3Q68CJ9 RN7SL163P-201ENST00000583100 276 ntBASIC17.08■□□□□ 0.32
CREB3L3Q68CJ9 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CREB3L3Q68CJ9 AC091271.1-201ENST00000611877 1162 ntBASIC17.08■□□□□ 0.32
CREB3L3Q68CJ9 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.08■□□□□ 0.32
CREB3L3Q68CJ9 AL033527.4-201ENST00000641026 673 ntBASIC17.08■□□□□ 0.32
CREB3L3Q68CJ9 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
CREB3L3Q68CJ9 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CREB3L3Q68CJ9 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CREB3L3Q68CJ9 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
CREB3L3Q68CJ9 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CREB3L3Q68CJ9 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CREB3L3Q68CJ9 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
CREB3L3Q68CJ9 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CREB3L3Q68CJ9 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC17.08■□□□□ 0.32
CREB3L3Q68CJ9 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
CREB3L3Q68CJ9 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CREB3L3Q68CJ9 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CREB3L3Q68CJ9 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC17.08■□□□□ 0.32
CREB3L3Q68CJ9 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CREB3L3Q68CJ9 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC17.07■□□□□ 0.32
CREB3L3Q68CJ9 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CREB3L3Q68CJ9 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CREB3L3Q68CJ9 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CREB3L3Q68CJ9 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC17.07■□□□□ 0.32
CREB3L3Q68CJ9 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CREB3L3Q68CJ9 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CREB3L3Q68CJ9 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CREB3L3Q68CJ9 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CREB3L3Q68CJ9 RAN-210ENST00000541630 1475 ntTSL 2 BASIC17.07■□□□□ 0.32
CREB3L3Q68CJ9 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CREB3L3Q68CJ9 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC17.07■□□□□ 0.32
CREB3L3Q68CJ9 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CREB3L3Q68CJ9 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CREB3L3Q68CJ9 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CREB3L3Q68CJ9 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CREB3L3Q68CJ9 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CREB3L3Q68CJ9 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CREB3L3Q68CJ9 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CREB3L3Q68CJ9 LINC00115-201ENST00000473798 1317 ntBASIC17.07■□□□□ 0.32
CREB3L3Q68CJ9 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms