Protein–RNA interactions for Protein: Q53TQ3

INO80D, INO80 complex subunit D, humanhuman

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
INO80DQ53TQ3 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
INO80DQ53TQ3 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.6□□□□□ -0.07
INO80DQ53TQ3 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
INO80DQ53TQ3 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
INO80DQ53TQ3 FRMPD2B-201ENST00000431305 1347 ntBASIC14.6□□□□□ -0.07
INO80DQ53TQ3 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.6□□□□□ -0.07
INO80DQ53TQ3 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
INO80DQ53TQ3 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
INO80DQ53TQ3 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
INO80DQ53TQ3 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
INO80DQ53TQ3 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
INO80DQ53TQ3 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
INO80DQ53TQ3 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
INO80DQ53TQ3 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
INO80DQ53TQ3 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
INO80DQ53TQ3 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 AC126335.2-201ENST00000623362 4637 ntBASIC14.59□□□□□ -0.07
INO80DQ53TQ3 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 RNA5SP359-201ENST00000364838 113 ntBASIC14.59□□□□□ -0.07
INO80DQ53TQ3 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 MSRA-203ENST00000441698 788 ntTSL 2 BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 AL353637.1-201ENST00000451571 732 ntBASIC14.59□□□□□ -0.07
INO80DQ53TQ3 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 AL512310.5-201ENST00000551999 515 ntBASIC14.59□□□□□ -0.07
INO80DQ53TQ3 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 AL022334.2-201ENST00000610000 484 ntBASIC14.59□□□□□ -0.07
INO80DQ53TQ3 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.59□□□□□ -0.07
INO80DQ53TQ3 HSPA7-201ENST00000445535 1927 ntBASIC14.58□□□□□ -0.07
INO80DQ53TQ3 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
INO80DQ53TQ3 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.58□□□□□ -0.07
INO80DQ53TQ3 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.58□□□□□ -0.07
INO80DQ53TQ3 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
INO80DQ53TQ3 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
INO80DQ53TQ3 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
INO80DQ53TQ3 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
INO80DQ53TQ3 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
INO80DQ53TQ3 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.58□□□□□ -0.07
INO80DQ53TQ3 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
INO80DQ53TQ3 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
INO80DQ53TQ3 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
INO80DQ53TQ3 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
INO80DQ53TQ3 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.58□□□□□ -0.08
INO80DQ53TQ3 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
INO80DQ53TQ3 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
INO80DQ53TQ3 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
INO80DQ53TQ3 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.58□□□□□ -0.08
INO80DQ53TQ3 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
INO80DQ53TQ3 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
INO80DQ53TQ3 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
INO80DQ53TQ3 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
INO80DQ53TQ3 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
INO80DQ53TQ3 AL662890.1-201ENST00000396818 632 ntBASIC14.58□□□□□ -0.08
INO80DQ53TQ3 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.58□□□□□ -0.08
INO80DQ53TQ3 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
INO80DQ53TQ3 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.58□□□□□ -0.08
INO80DQ53TQ3 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
INO80DQ53TQ3 AC012618.1-201ENST00000461223 412 ntBASIC14.58□□□□□ -0.08
INO80DQ53TQ3 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
INO80DQ53TQ3 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
INO80DQ53TQ3 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
INO80DQ53TQ3 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms