Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S2P59780 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
AP3S2P59780 LINC01165-201ENST00000445190 1623 ntBASIC12.43□□□□□ -0.42
AP3S2P59780 AL031719.1-201ENST00000623365 2587 ntBASIC12.43□□□□□ -0.42
AP3S2P59780 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.43□□□□□ -0.42
AP3S2P59780 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S2P59780 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
AP3S2P59780 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S2P59780 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
AP3S2P59780 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC12.43□□□□□ -0.42
AP3S2P59780 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
AP3S2P59780 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S2P59780 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC12.43□□□□□ -0.42
AP3S2P59780 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC12.43□□□□□ -0.42
AP3S2P59780 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S2P59780 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S2P59780 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
AP3S2P59780 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S2P59780 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S2P59780 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S2P59780 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S2P59780 AL445250.1-201ENST00000641671 2259 ntBASIC12.42□□□□□ -0.42
AP3S2P59780 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
AP3S2P59780 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC12.42□□□□□ -0.42
AP3S2P59780 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S2P59780 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S2P59780 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S2P59780 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S2P59780 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S2P59780 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC12.42□□□□□ -0.42
AP3S2P59780 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC12.42□□□□□ -0.42
AP3S2P59780 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S2P59780 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S2P59780 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S2P59780 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S2P59780 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.42□□□□□ -0.42
AP3S2P59780 AGGF1P10-201ENST00000635005 2191 ntBASIC12.42□□□□□ -0.42
AP3S2P59780 AC026271.4-201ENST00000578214 1833 ntBASIC12.42□□□□□ -0.42
AP3S2P59780 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S2P59780 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.42□□□□□ -0.42
AP3S2P59780 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S2P59780 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.42□□□□□ -0.42
AP3S2P59780 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S2P59780 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S2P59780 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC12.42□□□□□ -0.42
AP3S2P59780 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S2P59780 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC12.42□□□□□ -0.42
AP3S2P59780 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S2P59780 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S2P59780 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S2P59780 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC12.42□□□□□ -0.42
AP3S2P59780 FAM210CP-201ENST00000445714 574 ntBASIC12.42□□□□□ -0.42
AP3S2P59780 AC079781.3-201ENST00000449110 356 ntBASIC12.42□□□□□ -0.42
AP3S2P59780 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC12.42□□□□□ -0.42
AP3S2P59780 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.42□□□□□ -0.42
AP3S2P59780 KRT18P35-201ENST00000510488 1269 ntBASIC12.42□□□□□ -0.42
AP3S2P59780 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.42□□□□□ -0.42
AP3S2P59780 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.42□□□□□ -0.42
AP3S2P59780 AC040169.1-201ENST00000565382 521 ntBASIC12.42□□□□□ -0.42
AP3S2P59780 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC12.42□□□□□ -0.42
AP3S2P59780 SLC25A6P4-201ENST00000586535 553 ntBASIC12.42□□□□□ -0.42
AP3S2P59780 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC12.42□□□□□ -0.42
AP3S2P59780 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.42□□□□□ -0.42
AP3S2P59780 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
AP3S2P59780 AC012313.10-201ENST00000623509 926 ntBASIC12.42□□□□□ -0.42
AP3S2P59780 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S2P59780 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S2P59780 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC12.42□□□□□ -0.42
AP3S2P59780 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S2P59780 DLGAP2-214ENST00000612087 10088 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
AP3S2P59780 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.42□□□□□ -0.42
AP3S2P59780 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S2P59780 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S2P59780 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.42□□□□□ -0.42
AP3S2P59780 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC12.42□□□□□ -0.42
AP3S2P59780 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S2P59780 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
AP3S2P59780 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S2P59780 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S2P59780 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC12.42□□□□□ -0.42
AP3S2P59780 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.42□□□□□ -0.42
AP3S2P59780 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S2P59780 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S2P59780 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S2P59780 AC060814.4-201ENST00000594169 2163 ntBASIC12.42□□□□□ -0.42
AP3S2P59780 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S2P59780 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S2P59780 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
AP3S2P59780 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
AP3S2P59780 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.41□□□□□ -0.42
AP3S2P59780 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
AP3S2P59780 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
AP3S2P59780 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
AP3S2P59780 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
AP3S2P59780 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
AP3S2P59780 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
AP3S2P59780 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.41□□□□□ -0.42
AP3S2P59780 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC12.41□□□□□ -0.42
AP3S2P59780 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.41□□□□□ -0.42
AP3S2P59780 GHET1-201ENST00000627071 1906 ntBASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms